RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 IGLV1-47P01700 117 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 ASIPP42127 132 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 PRR20EP86478 221 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 PRR20CP86479 221 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 PRR20DP86480 221 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 PRR20BP86481 221 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 PRR20AP86496 221 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 ZNF841Q6ZN19 808 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 RNASE4P34096 147 aaKnown RBP11.56□□□□□ -0.56
TCOF1-202ENST00000377797 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-202ENST00000377797 LYRM7Q5U5X0 104 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 BEX4Q9NWD9 120 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-202ENST00000377797 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 IGHV4-30-2A0A087WSY4 118 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 FAM223BA6NKX1 122 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 CD33P20138 364 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 FAM223AQ8IWN6 122 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 NRGNQ92686 78 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 RITA1Q96K30 269 aa11.56□□□□□ -0.56
TCOF1-202ENST00000377797 SPATA45Q537H7 98 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 LY96Q9Y6Y9 160 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 IGLC1P0CG04 106 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 GZMBP10144 247 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 PPIFP30405 207 aaKnown RBP11.55□□□□□ -0.56
TCOF1-202ENST00000377797 ADMP35318 185 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 PRUNE2Q8WUY3 3088 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 LDLRAD2Q5SZI1 272 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 UTF1Q5T230 341 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 REC114Q7Z4M0 266 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 OR10AG1Q8NH19 301 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 PRELID3AQ96N28 172 aa11.55□□□□□ -0.56
TCOF1-202ENST00000377797 KIAA1549Q9HCM3 1950 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 LYPD1Q8N2G4 141 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 Q8TAT8 98 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 OVOL3O00110 214 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 VWC2Q2TAL6 325 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 JMJD8Q96S16 334 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 KLF2Q9Y5W3 355 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-202ENST00000377797 ABCA2Q9BZC7 2435 aa11.54□□□□□ -0.56
TCOF1-202ENST00000377797 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
TCOF1-202ENST00000377797 LYPD6BQ8NI32 183 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 GGTLC3B5MD39 225 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 SERF1AO75920 110 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 ZFP36P26651 326 aaKnown RBP11.53□□□□□ -0.56
TCOF1-202ENST00000377797 LCN12Q6JVE5 192 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 USP9XQ93008 2570 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-202ENST00000377797 UQCR10Q9UDW1 63 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 A0A1B0GW15 77 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 FOLR2P14207 255 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 SCGB1D4Q6XE38 83 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 FAM19A2Q8N3H0 131 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 WNK1Q9H4A3 2382 aa11.53□□□□□ -0.56
TCOF1-202ENST00000377797 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-202ENST00000377797 CTAG1AP78358 180 aa11.52□□□□□ -0.56
TCOF1-202ENST00000377797 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.56
TCOF1-202ENST00000377797 GNB1LQ9BYB4 327 aa11.52□□□□□ -0.56
TCOF1-202ENST00000377797 C19orf84I3L1E1 186 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 TCTAP57738 103 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 ZNF56Q15929 161 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 PSMG4Q5JS54 123 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 Q8N7P7 452 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 THAP8Q8NA92 274 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 WFDC12Q8WWY7 111 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 SLC25A2Q9BXI2 301 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 KLK15Q9H2R5 256 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
TCOF1-202ENST00000377797 OVOL1O14753 267 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 ZNF688P0C7X2 276 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 NUTF2P61970 127 aaKnown RBP11.52□□□□□ -0.57
TCOF1-202ENST00000377797 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 C10orf105Q8TEF2 133 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 NUDT3O95989 172 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 BRWD1-AS2P59051 145 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 EXPH5Q8NEV8 1989 aa11.52□□□□□ -0.57
TCOF1-202ENST00000377797 TRAV21A0A0B4J279 112 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 APOHP02749 345 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-202ENST00000377797 ORMDL3Q8N138 153 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 PDE6HQ13956 83 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 PMCHL1Q16048 86 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 TMEM190Q8WZ59 177 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 PSG3Q16557 428 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 RRN3P1Q2M238 152 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 C5orf52A6NGY3 159 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 J3QLI3 93 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
TCOF1-202ENST00000377797 PAX1P15863 534 aa11.5□□□□□ -0.57
TCOF1-202ENST00000377797 C10orf91Q5T1B1 145 aa11.5□□□□□ -0.57
TCOF1-202ENST00000377797 ATOH7Q8N100 152 aa11.5□□□□□ -0.57
TCOF1-202ENST00000377797 ZNF138P52744 262 aa11.5□□□□□ -0.57
TCOF1-202ENST00000377797 PSMB2P49721 201 aa11.5□□□□□ -0.57
TCOF1-202ENST00000377797 DAZ1Q9NQZ3 744 aaKnown RBP11.5□□□□□ -0.57
TCOF1-202ENST00000377797 LRRK2Q5S007 2527 aa11.5□□□□□ -0.57
TCOF1-202ENST00000377797 CD7P09564 240 aa11.5□□□□□ -0.57
TCOF1-202ENST00000377797 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 TRBV19A0A075B6N1 114 aa11.49□□□□□ -0.57
TCOF1-202ENST00000377797 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms