RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SIGLEC9Q9Y336 463 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 CEP250Q9BV73 2442 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 SPRY3O43610 288 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 SMCPP49901 116 aaPredicted RBP12.44□□□□□ -0.42
FXN-201ENST00000377270 CAMPP49913 170 aa12.44□□□□□ -0.42
FXN-201ENST00000377270 SSBP3Q9BWW4 388 aaPredicted RBP12.44□□□□□ -0.42
FXN-201ENST00000377270 C16orf97H3BN30 126 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 TNFRSF6BO95407 300 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 IGLV2-8P01709 118 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 IGHV3-13P01766 116 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 EVI2AP22794 236 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 NHLRC2Q8NBF2 726 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 CARD19Q96LW7 228 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 ZNRF1Q8ND25 227 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 ICE1Q9Y2F5 2266 aa12.43□□□□□ -0.42
FXN-201ENST00000377270 MYOD1P15172 320 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 CD24P25063 80 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 POU2AF1Q16633 256 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 ASPHD1Q5U4P2 390 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 FAM168AQ92567 244 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 TRAV4A0A0B4J268 109 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 COL8A2P25067 703 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 NMUP48645 174 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 RASL10AQ92737 203 aa12.42□□□□□ -0.42
FXN-201ENST00000377270 PRSS46E5RG02 174 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 MGST3O14880 152 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 ZNF138P52744 262 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 LSM4Q9Y4Z0 139 aaKnown RBP12.41□□□□□ -0.42
FXN-201ENST00000377270 FAM27E3Q08E93 113 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 FAM90A1Q86YD7 464 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 PRSS33Q8NF86 280 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 ITLN1Q8WWA0 313 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 RPEQ96AT9 228 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 LINC01587Q99440 93 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 FAM90A9PA6NNJ1 464 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 PRRG2O14669 202 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 FAM201AQ5SY85 155 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 IGF2BP2-AS1Q96M15 143 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 TMEM167BQ9NRX6 74 aa12.41□□□□□ -0.42
FXN-201ENST00000377270 A8MWL6 223 aa12.4□□□□□ -0.42
FXN-201ENST00000377270 PROP1O75360 226 aa12.4□□□□□ -0.42
FXN-201ENST00000377270 SNCGO76070 127 aa12.4□□□□□ -0.42
FXN-201ENST00000377270 C22orf34Q6ZV56 151 aa12.4□□□□□ -0.42
FXN-201ENST00000377270 SLC25A10Q9UBX3 287 aaPredicted RBP12.4□□□□□ -0.42
FXN-201ENST00000377270 FCGR3BO75015 233 aa12.4□□□□□ -0.43
FXN-201ENST00000377270 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.43
FXN-201ENST00000377270 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.43
FXN-201ENST00000377270 NUP35Q8NFH5 326 aa12.4□□□□□ -0.43
FXN-201ENST00000377270 FAM234AQ9H0X4 552 aa12.4□□□□□ -0.43
FXN-201ENST00000377270 HEYLQ9NQ87 328 aaPredicted RBP12.4□□□□□ -0.43
FXN-201ENST00000377270 LHBP01229 141 aa12.39□□□□□ -0.43
FXN-201ENST00000377270 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
FXN-201ENST00000377270 GVINP1Q7Z2Y8 2422 aa12.39□□□□□ -0.43
FXN-201ENST00000377270 TCRBV4S1A1TA0A5B7 111 aa12.39□□□□□ -0.43
FXN-201ENST00000377270 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
FXN-201ENST00000377270 ANKRD11Q6UB99 2663 aaPredicted RBP12.38□□□□□ -0.43
FXN-201ENST00000377270 IGLV3-9A0A075B6K5 115 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 C9JAW5 83 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 CRLF1O75462 422 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 ZNF134P52741 427 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 C3orf36Q3SXR2 165 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 RPL39P5Q59GN2 51 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 ASCL5Q7RTU5 278 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 FAM57AQ8TBR7 257 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 ZNF747Q9BV97 191 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 HIGD1AQ9Y241 93 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 ACTL6BO94805 426 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 FAM106CPP0CH98 169 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 LOXL3P58215 753 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 FAM106AQ4KMX7 169 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 PRR30Q53SZ7 412 aaPredicted RBP12.38□□□□□ -0.43
FXN-201ENST00000377270 ZNF355PQ9NSJ1 428 aa12.38□□□□□ -0.43
FXN-201ENST00000377270 GGTLC3B5MD39 225 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 TMEM262E9PQX1 116 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 LEAP2Q969E1 77 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 CALYQ9NYX4 217 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 SPTBN2O15020 2390 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 LINC01548A6NM66 108 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 GFRA3O60609 400 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 TNFAIP6P98066 277 aaPredicted RBP12.37□□□□□ -0.43
FXN-201ENST00000377270 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 TMEM101Q96IK0 257 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 CHAC1Q9BUX1 264 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
FXN-201ENST00000377270 COL8A1P27658 744 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 UTF1Q5T230 341 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 ABHD12Q8N2K0 398 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 OR13C6PQ8NH95 151 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 FBXL15Q9H469 300 aa12.36□□□□□ -0.43
FXN-201ENST00000377270 IDI2-AS1Q9NZ38 188 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms