RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 OR4B1Q8NGF8 309 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 HSPB9Q9BQS6 159 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 C16orf95Q9H693 158 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 ZNF586Q9NXT0 402 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 A0A1W2PPI3 338 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 GPX1P07203 203 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 WT1-ASQ06250 92 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 OR5I1Q13606 314 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 TMEM136Q6ZRR5 245 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 C11orf44Q8N8P7 122 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 CFHR4Q92496 578 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 PAXXQ9BUH6 204 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 VAMP8Q9BV40 100 aa9.7□□□□□ -0.86
VRK3-202ENST00000377011 IGHV3-72A0A0B4J1Y9 119 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 A0A1B0GUS0 222 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 CGB1A6NKQ9 187 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 CORTO00230 105 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
VRK3-202ENST00000377011 CRYGCP07315 174 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 GATA2P23769 480 aaPredicted RBP9.69□□□□□ -0.86
VRK3-202ENST00000377011 GAGE1Q13065 139 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 ZNF705AQ6ZN79 300 aaPredicted RBP9.69□□□□□ -0.86
VRK3-202ENST00000377011 TRGV9Q99603 122 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 CITED1Q99966 193 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 ZNF355PQ9NSJ1 428 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 SERTAD4Q9NUC0 356 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 NAT8BQ9UHF3 227 aa9.69□□□□□ -0.86
VRK3-202ENST00000377011 AMMECR1Q9Y4X0 333 aaPredicted RBP9.69□□□□□ -0.86
VRK3-202ENST00000377011 IGKV1D-37A0A075B6S9 117 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 PEX7O00628 323 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 TIMM23O14925 209 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 ZNF329Q86UD4 541 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 OR2T6Q8NHC8 308 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 FNDC4Q9H6D8 234 aaPredicted RBP9.68□□□□□ -0.86
VRK3-202ENST00000377011 MYCNOSP40205 109 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 PRRX1P54821 245 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 MLANAQ16655 118 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 C19orf35Q6ZS72 473 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 NPIPB3Q92617 1050 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 FXYD5Q96DB9 178 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 GRAMD2BQ96HH9 432 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 RNASE7Q9H1E1 156 aaKnown RBP9.68□□□□□ -0.86
VRK3-202ENST00000377011 GNB4Q9HAV0 340 aa9.68□□□□□ -0.86
VRK3-202ENST00000377011 MGST1P10620 155 aaKnown RBP9.67□□□□□ -0.86
VRK3-202ENST00000377011 PLP1P60201 277 aa9.67□□□□□ -0.86
VRK3-202ENST00000377011 C10orf99Q6UWK7 81 aa9.67□□□□□ -0.86
VRK3-202ENST00000377011 PATE2Q6UY27 113 aa9.67□□□□□ -0.86
VRK3-202ENST00000377011 RBM14Q96PK6 669 aaKnown RBP9.67□□□□□ -0.86
VRK3-202ENST00000377011 MRPL27Q9P0M9 148 aaKnown RBP9.67□□□□□ -0.86
VRK3-202ENST00000377011 IGLC7A0M8Q6 106 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 E7EUB6 86 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 ZNF253O75346 499 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 CRYGBP07316 175 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
VRK3-202ENST00000377011 MORN5Q5VZ52 161 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 ATP5L2Q7Z4Y8 100 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 TMEM116Q8NCL8 245 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 RPEQ96AT9 228 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 SRSF8Q9BRL6 282 aaKnown RBP9.66□□□□□ -0.86
VRK3-202ENST00000377011 ZNF331Q9NQX6 463 aaPredicted RBP9.66□□□□□ -0.86
VRK3-202ENST00000377011 KLF12Q9Y4X4 402 aa9.66□□□□□ -0.86
VRK3-202ENST00000377011 TRAV5A0A0B4J249 113 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 IGHV1-3A0A0C4DH29 117 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 SLC25A17O43808 307 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 RPL27AP46776 148 aaKnown RBP9.65□□□□□ -0.86
VRK3-202ENST00000377011 MRGPRG-AS1Q2M3A8 158 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 CT83Q5H943 113 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 Q8N2B8 174 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 KLHDC1Q8N7A1 406 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 VN1R17PQ8TDU5 208 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 RITA1Q96K30 269 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 RNF5Q99942 180 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 NRN1Q9NPD7 142 aa9.65□□□□□ -0.86
VRK3-202ENST00000377011 A0A1W2PS18 150 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 LINC01548A6NM66 108 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 DIRC3C9JPN6 131 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 BMPR1BO00238 502 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 ZNF324O75467 553 aaPredicted RBP9.65□□□□□ -0.87
VRK3-202ENST00000377011 APCSP02743 223 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 FXYD3Q14802 87 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 FAM162BQ5T6X4 162 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 LINC00305Q7Z4B0 112 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 TMEM68Q96MH6 324 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 ATG101Q9BSB4 218 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 NPFFR1Q9GZQ6 430 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 PPP1R14DQ9NXH3 145 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 FBXL7Q9UJT9 491 aa9.65□□□□□ -0.87
VRK3-202ENST00000377011 PRKDCP78527 4128 aaKnown RBP9.64□□□□□ -0.87
VRK3-202ENST00000377011 OR2J3O76001 311 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 PYYP10082 97 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 CD28P10747 220 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 AMTP48728 403 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 SSBP2P81877 361 aaPredicted RBP9.64□□□□□ -0.87
VRK3-202ENST00000377011 C10orf55Q5SWW7 151 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 TSKUQ8WUA8 353 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 ZNF492Q9P255 531 aa9.64□□□□□ -0.87
VRK3-202ENST00000377011 EPDR1Q9UM22 224 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms