RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 U3KQ87 197 aa1.9□□□□□ -2.11
RNU6-1249P-201ENST00000363237 CDK5RAP2Q96SN8 1893 aa1.9□□□□□ -2.11
RNU6-1249P-201ENST00000363237 NCKAP5O14513 1909 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 WDR7Q9Y4E6 1490 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 IGKV3D-11A0A0A0MRZ8 115 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TRGV4A0A0C4DH28 118 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 UBL3O95164 117 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SPCS2Q15005 226 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ELOBQ15370 118 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TPRXLQ17RH7 258 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TMEM155Q4W5P6 130 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 KIAA2026Q5HYC2 2103 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TMEM14EPQ6UXP3 125 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 Q8IYB0 196 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 C9orf163Q8N9P6 203 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 C1orf54Q8WWF1 131 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 VPS25Q9BRG1 176 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SMIM3Q9BZL3 60 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TAF9BQ9HBM6 251 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 DISP1Q96F81 1524 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 FAM135BQ49AJ0 1406 aa1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 COL11A1P12107 1806 aaPredicted RBP1.89□□□□□ -2.11
RNU6-1249P-201ENST00000363237 PLXNA3P51805 1871 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 NOTCH2Q04721 2471 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 J3QR89 54 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 K7EP13 123 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 M0R2Z0 102 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 MT-ND4LP03901 98 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ASAH2BP0C7U1 165 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SSR2P43308 183 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ROMO1P60602 79 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 MAXP61244 160 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 LSM3P62310 102 aaKnown RBP1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ZNF846Q147U1 533 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 CDK5R1Q15078 307 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 RNASE10Q5GAN6 216 aaKnown RBP1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TMEM244Q5VVB8 128 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TSTD1Q8NFU3 115 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 OR2T35Q8NGX2 323 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TMEM254Q8TBM7 123 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 DISP2A7MBM2 1401 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 CCDC171Q6TFL3 1326 aa1.88□□□□□ -2.11
RNU6-1249P-201ENST00000363237 OR2T8A6NH00 312 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 H3BRN7 92 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 M0R233 179 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 UQCRQO14949 82 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TPST1O60507 370 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ZNF737O75373 536 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TPT1P13693 172 aaKnown RBP1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 FABP4P15090 132 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 KDM5CP41229 1560 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 KRTAP13-3Q3SY46 172 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 HSD17B12Q53GQ0 312 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 GLYATL3Q5SZD4 288 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 RPL13AP3Q6NVV1 102 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 MMGT1Q8N4V1 131 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 HYLS1Q96M11 299 aa1.87□□□□□ -2.11
RNU6-1249P-201ENST00000363237 RFX7Q2KHR2 1363 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 MPDZO75970 2070 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 KDM6AO15550 1401 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 STRCP1A6NGW2 1772 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 hDV103S1A0JD37 113 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SMIM24O75264 130 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 NCR2O95944 276 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 IGLV1-51P01701 117 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 CRPP02741 224 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TSPAN19P0C672 248 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SAA1P0DJI8 122 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ZNF93P35789 620 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 FOXA3P55318 350 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 DSCR4P56555 118 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 NCS1P62166 190 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 QRFPP83859 136 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 CDK6Q00534 326 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 HES1Q14469 280 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 HAGHLQ6PII5 290 aaPredicted RBP1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 LINC00311Q8N616 119 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 Q8N814 137 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 OR5D14Q8NGL3 314 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 CCL4L1Q8NHW4 92 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SPACA4Q8TDM5 124 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 MUCL1Q96DR8 90 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TXNDC17Q9BRA2 123 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 BANF2Q9H503 90 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TPRKBQ9Y3C4 175 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 MYO9BQ13459 2157 aa1.86□□□□□ -2.11
RNU6-1249P-201ENST00000363237 MYH1P12882 1939 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ZFC3H1O60293 1989 aaKnown RBP1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 PRG4Q92954 1404 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TRAV12-1A0A0B4J245 112 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 A0A1W2PNU3 283 aaPredicted RBP1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 F8W036 122 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 HBDP02042 147 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TCRAP04437 139 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 DNAJB13P59910 316 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 OR4C12Q96R67 309 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TTTY12Q9BZ98 90 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 NIT2Q9NQR4 276 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms