RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 SFRP2Q96HF1 295 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 NEU1Q99519 415 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 PEMTQ9UBM1 199 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 FAM223BA6NKX1 122 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 B4DEV8 164 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 C9JCJ5 164 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 ISLRO14498 428 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 SCGB1D1O95968 90 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 IGKV1-17P01599 117 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 TRGC2P03986 189 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 SRSF1Q07955 248 aaKnown RBP eCLIP4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 TWIST1Q15672 202 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 SMUG1Q53HV7 270 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 C8orf86Q6ZUL3 223 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 FAM223AQ8IWN6 122 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 C3orf56Q8N813 242 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 CDC42EP3Q9UKI2 254 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 CD5P06127 495 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 P0C879 139 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 GZMBP10144 247 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 HLA-DMBP28068 263 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 EMP1P54849 157 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 ZNF491Q8N8L2 437 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 OR1N2Q8NGR9 330 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 SRSF8Q9BRL6 282 aaKnown RBP4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 SDF2L1Q9HCN8 221 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 OTORQ9NRC9 128 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 PSG8Q9UQ74 426 aa4.31□□□□□ -1.72
PCDH11X-202ENST00000361655 LY6LH3BQJ8 138 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 TCF21O43680 179 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 TRBV12-3P01733 135 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 ERCC8Q13216 396 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 RNASEKQ6P5S7 137 aaKnown RBP4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 VN1R17PQ8TDU5 208 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 GPR82Q96P67 336 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 ATG101Q9BSB4 218 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 RNF114Q9Y508 228 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 LOC389332A0A1B0GUA5 103 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 I3L2K1 104 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 M0R381 172 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 ZNF253O75346 499 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 HSBP1O75506 76 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 NDUFA3O95167 84 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 LRRC75A-AS1Q8N1F1 130 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 SHANK2-AS3Q9BTD1 123 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 CRYBG3Q68DQ2 2970 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 UNC79Q9P2D8 2635 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 UTP20O75691 2785 aaKnown RBP4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 IGLV11-55A0A075B6I3 123 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 CTSGP08311 255 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 CBLN1P23435 193 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 S100A12P80511 92 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 PRR20EP86478 221 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 PRR20CP86479 221 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 PRR20DP86480 221 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 PRR20BP86481 221 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 PRR20AP86496 221 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 FANCD2OSQ96PS1 177 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 TUBA4BQ9H853 241 aa4.3□□□□□ -1.72
PCDH11X-202ENST00000361655 ITPR1Q14643 2758 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 TRAV1-1A0A0B4J248 108 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 A6NDX4 124 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 FSTL3O95633 263 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 SLURP1P55000 103 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 FOXA3P55318 350 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 YPEL3P61236 119 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 TCTEX1D4Q5JR98 221 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 ACTL10Q5JWF8 245 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 LCN12Q6JVE5 192 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 FAM159AQ6UWV7 190 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 AJUBAQ96IF1 538 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 RAX2Q96IS3 184 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 PSMG3-AS1Q96PY0 264 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 IMMP2LQ96T52 175 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 PARD6GQ9BYG4 376 aaPredicted RBP4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 PRDM13Q9H4Q3 707 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 LSM4Q9Y4Z0 139 aaKnown RBP4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 PHLDA3Q9Y5J5 127 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 ITPR2Q14571 2701 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 A0A1B0GW64 132 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 DNAJC9-AS1A6NH13 148 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 LY6G6DO95868 133 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 TCRAP04437 139 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 CRISP2P16562 243 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 ADCYAP1P18509 176 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 SAPCD1Q5SSQ6 148 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 PATE2Q6UY27 113 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 C1QL4Q86Z23 238 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 SLC25A2Q9BXI2 301 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 GGTLC3B5MD39 225 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 FNDC10F2Z333 226 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 S100A8P05109 93 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 RIGQ13278 110 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 SLC50A1Q9BRV3 221 aa4.29□□□□□ -1.72
PCDH11X-202ENST00000361655 DSCAML1Q8TD84 2053 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 F6UB75 175 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 IGHG2P01859 326 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms