RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 OR4C5Q8NGB2 326 aa16.83■□□□□ 0.28
PTPN18-202ENST00000347849 PERPQ96FX8 193 aa16.83■□□□□ 0.28
PTPN18-202ENST00000347849 PRSS22Q9GZN4 317 aa16.83■□□□□ 0.28
PTPN18-202ENST00000347849 CRXO43186 299 aaPredicted RBP16.82■□□□□ 0.28
PTPN18-202ENST00000347849 VAMP3Q15836 100 aa16.82■□□□□ 0.28
PTPN18-202ENST00000347849 FAM162BQ5T6X4 162 aa16.82■□□□□ 0.28
PTPN18-202ENST00000347849 STXBP6Q8NFX7 210 aa16.82■□□□□ 0.28
PTPN18-202ENST00000347849 IGHV2-70DA0A0C4DH43 119 aa16.82■□□□□ 0.28
PTPN18-202ENST00000347849 ZNF138P52744 262 aa16.82■□□□□ 0.28
PTPN18-202ENST00000347849 C22orf15Q8WYQ4 148 aa16.82■□□□□ 0.28
PTPN18-202ENST00000347849 MCRIP2Q9BUT9 160 aaKnown RBP16.82■□□□□ 0.28
PTPN18-202ENST00000347849 MAP1AP78559 2803 aaPredicted RBP16.82■□□□□ 0.28
PTPN18-202ENST00000347849 PAX2Q02962 417 aa16.81■□□□□ 0.28
PTPN18-202ENST00000347849 DAZAP1Q96EP5 407 aaKnown RBP16.81■□□□□ 0.28
PTPN18-202ENST00000347849 CHCHD1Q96BP2 118 aaKnown RBP16.81■□□□□ 0.28
PTPN18-202ENST00000347849 ST20Q9HBF5 79 aa16.81■□□□□ 0.28
PTPN18-202ENST00000347849 K7EP13 123 aa16.8■□□□□ 0.28
PTPN18-202ENST00000347849 OVOL3O00110 214 aa16.8■□□□□ 0.28
PTPN18-202ENST00000347849 NUDT3O95989 172 aa16.8■□□□□ 0.28
PTPN18-202ENST00000347849 DOPEY1Q5JWR5 2465 aa16.8■□□□□ 0.28
PTPN18-202ENST00000347849 H0Y8G0 127 aa16.8■□□□□ 0.28
PTPN18-202ENST00000347849 PLGLAQ15195 96 aa16.8■□□□□ 0.28
PTPN18-202ENST00000347849 SRSF12Q8WXF0 261 aaKnown RBP16.8■□□□□ 0.28
PTPN18-202ENST00000347849 CELSR2Q9HCU4 2923 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 C19orf71A6NCJ1 209 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 IGHV4-39P01824 125 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 HOXB4P17483 251 aaPredicted RBP16.79■□□□□ 0.28
PTPN18-202ENST00000347849 LMO4P61968 165 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 SMIM12Q96EX1 92 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 TIMM8BQ9Y5J9 83 aaPredicted RBP16.79■□□□□ 0.28
PTPN18-202ENST00000347849 MYO18BQ8IUG5 2567 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 LTAP01374 205 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 FMC1Q96HJ9 113 aa16.79■□□□□ 0.28
PTPN18-202ENST00000347849 GSX1Q9H4S2 264 aaPredicted RBP16.79■□□□□ 0.28
PTPN18-202ENST00000347849 CHEK1O14757 476 aa16.78■□□□□ 0.28
PTPN18-202ENST00000347849 RBPMS2Q6ZRY4 209 aaKnown RBP16.78■□□□□ 0.28
PTPN18-202ENST00000347849 C5orf17Q8NAS9 161 aa16.78■□□□□ 0.28
PTPN18-202ENST00000347849 BBC3Q96PG8 261 aaPredicted RBP16.78■□□□□ 0.28
PTPN18-202ENST00000347849 SIRPDQ9H106 197 aa16.78■□□□□ 0.28
PTPN18-202ENST00000347849 Q9H3A6 140 aa16.78■□□□□ 0.28
PTPN18-202ENST00000347849 SPG11Q96JI7 2443 aa16.78■□□□□ 0.28
PTPN18-202ENST00000347849 TCRAP04437 139 aa16.78■□□□□ 0.28
PTPN18-202ENST00000347849 TRAV8-1A0A0A6YYK1 113 aa16.77■□□□□ 0.28
PTPN18-202ENST00000347849 PVRIGQ6DKI7 326 aa16.77■□□□□ 0.28
PTPN18-202ENST00000347849 SLC25A34Q6PIV7 304 aa16.77■□□□□ 0.28
PTPN18-202ENST00000347849 C1RLQ9NZP8 487 aa16.77■□□□□ 0.28
PTPN18-202ENST00000347849 HSBP1L1C9JCN9 74 aa16.77■□□□□ 0.27
PTPN18-202ENST00000347849 HES1Q14469 280 aa16.77■□□□□ 0.27
PTPN18-202ENST00000347849 CT83Q5H943 113 aa16.77■□□□□ 0.27
PTPN18-202ENST00000347849 TMEM191AQ9H0A3 160 aa16.77■□□□□ 0.27
PTPN18-202ENST00000347849 LOC102724200A0A096LPH7 203 aaPredicted RBP16.76■□□□□ 0.27
PTPN18-202ENST00000347849 CRYGCP07315 174 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 CSN3P07498 182 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 CIARTQ8N365 385 aaPredicted RBP16.76■□□□□ 0.27
PTPN18-202ENST00000347849 SOX21Q9Y651 276 aaPredicted RBP16.76■□□□□ 0.27
PTPN18-202ENST00000347849 TAX1BP3O14907 124 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 TOX4O94842 621 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 COL8A1P27658 744 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 CEACAM3P40198 252 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 RNF151Q2KHN1 245 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 BVES-AS1Q5T3Y7 98 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 ETFRF1Q6IPR1 90 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 C1orf122Q6ZSJ8 110 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 PMCHL2Q9BQD1 86 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 NDFIP1Q9BT67 221 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 MAP1LC3CQ9BXW4 147 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 ZNF492Q9P255 531 aa16.76■□□□□ 0.27
PTPN18-202ENST00000347849 TRAV30A0A087WSZ9 112 aa16.75■□□□□ 0.27
PTPN18-202ENST00000347849 NBR2O15453 112 aa16.75■□□□□ 0.27
PTPN18-202ENST00000347849 GP9P14770 177 aa16.75■□□□□ 0.27
PTPN18-202ENST00000347849 F11RQ9Y624 299 aaKnown RBP16.75■□□□□ 0.27
PTPN18-202ENST00000347849 ZNF462Q96JM2 2506 aa16.75■□□□□ 0.27
PTPN18-202ENST00000347849 RNF5Q99942 180 aa16.75■□□□□ 0.27
PTPN18-202ENST00000347849 GFRA4Q9GZZ7 299 aa16.75■□□□□ 0.27
PTPN18-202ENST00000347849 MUC21A0A0G2JKD1 596 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 MUC21A0A140T8X8 626 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 CNIH1O95406 144 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 CDKN1BP46527 198 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 MUC21Q5SSG8 566 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 Q71RC1 249 aaPredicted RBP16.74■□□□□ 0.27
PTPN18-202ENST00000347849 TRGV9Q99603 122 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 TMUB1Q9BVT8 246 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 CBY3A6NI87 242 aa16.74■□□□□ 0.27
PTPN18-202ENST00000347849 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.73■□□□□ 0.27
PTPN18-202ENST00000347849 OR2T8A6NH00 312 aa16.73■□□□□ 0.27
PTPN18-202ENST00000347849 PRNTQ86SH4 94 aa16.73■□□□□ 0.27
PTPN18-202ENST00000347849 AJUBAQ96IF1 538 aa16.73■□□□□ 0.27
PTPN18-202ENST00000347849 RNF24Q9Y225 148 aa16.73■□□□□ 0.27
PTPN18-202ENST00000347849 KLF17Q5JT82 389 aaPredicted RBP16.73■□□□□ 0.27
PTPN18-202ENST00000347849 SCRT2Q9NQ03 307 aa16.73■□□□□ 0.27
PTPN18-202ENST00000347849 NDUFA3O95167 84 aa16.72■□□□□ 0.27
PTPN18-202ENST00000347849 OR5AL1P0C617 328 aa16.72■□□□□ 0.27
PTPN18-202ENST00000347849 PRB4P10163 310 aaPredicted RBP16.72■□□□□ 0.27
PTPN18-202ENST00000347849 EXOC3-AS1Q8N2X6 119 aa16.72■□□□□ 0.27
PTPN18-202ENST00000347849 NPBQ8NG41 125 aa16.72■□□□□ 0.27
PTPN18-202ENST00000347849 TMEM116Q8NCL8 245 aa16.72■□□□□ 0.27
PTPN18-202ENST00000347849 A0A087X0K7 114 aa16.71■□□□□ 0.27
PTPN18-202ENST00000347849 PET117Q6UWS5 81 aa16.71■□□□□ 0.27
PTPN18-202ENST00000347849 C12orf54Q6X4T0 127 aa16.71■□□□□ 0.27
PTPN18-202ENST00000347849 DEFB125Q8N687 156 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms