RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ZNF320A2RRD8 509 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 C7orf77A4D0Y5 90 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 HELTA6NFD8 242 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 LGALS9O00182 355 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 SLC17A3O00476 420 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 PROK1P58294 105 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 PNRC1Q12796 327 aaPredicted RBP8.37□□□□□ -1.07
ECM1-201ENST00000346569 KLF5Q13887 457 aaPredicted RBP8.37□□□□□ -1.07
ECM1-201ENST00000346569 ZNF674Q2M3X9 581 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 RPEL1Q2QD12 228 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 REC114Q7Z4M0 266 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 ARL6IP6Q8N6S5 226 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 C4orf3Q8WVX3 66 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 HIST1H2BAQ96A08 127 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 KLF12Q9Y4X4 402 aa8.37□□□□□ -1.07
ECM1-201ENST00000346569 ANK2Q01484 3957 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 IGHV3-66A0A0C4DH42 116 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 A0A1W2PS18 150 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 C9JCJ5 164 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 HAX1O00165 279 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 SLC25A5P05141 298 aaKnown RBP8.36□□□□□ -1.07
ECM1-201ENST00000346569 CD28P10747 220 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
ECM1-201ENST00000346569 TAS2R60P59551 318 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 RPL23P62829 140 aaKnown RBP8.36□□□□□ -1.07
ECM1-201ENST00000346569 AWAT1Q58HT5 328 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 EXOC3-AS1Q8N2X6 119 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 C5orf17Q8NAS9 161 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 LINC00479Q96M42 142 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 ZNF331Q9NQX6 463 aaPredicted RBP8.36□□□□□ -1.07
ECM1-201ENST00000346569 DAZ1Q9NQZ3 744 aaKnown RBP8.36□□□□□ -1.07
ECM1-201ENST00000346569 RNF114Q9Y508 228 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 LY96Q9Y6Y9 160 aa8.36□□□□□ -1.07
ECM1-201ENST00000346569 ATRQ13535 2644 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 ZNF785A8K8V0 405 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 B4DEV8 164 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 M0R036 132 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 DNASE2O00115 360 aaPredicted RBP8.35□□□□□ -1.07
ECM1-201ENST00000346569 PEX7O00628 323 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 CHEK1O14757 476 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
ECM1-201ENST00000346569 GALR1P47211 349 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 GNG5P63218 68 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 PSG9Q00887 426 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 RHEBQ15382 184 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 PRIMA1Q86XR5 153 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 OCC1Q8TAD7 63 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 RHPN1-AS1Q9BWJ2 59 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 UFC1Q9Y3C8 167 aa8.35□□□□□ -1.07
ECM1-201ENST00000346569 A0A087WWC5 75 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 TMEM213A2RRL7 107 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 A8MWP6 167 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 LINC01619G3V211 115 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 IGLV2-8P01709 118 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 TCRAP04437 139 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 ATF4P18848 351 aaPredicted RBP8.34□□□□□ -1.07
ECM1-201ENST00000346569 MEOX2P50222 304 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 BTN1A1Q13410 526 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 LINC01551Q86U37 167 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 OR11H1Q8NG94 326 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 OR1N2Q8NGR9 330 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 ATG101Q9BSB4 218 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 RPS10P5Q9NQ39 176 aa8.34□□□□□ -1.07
ECM1-201ENST00000346569 S100A9P06702 114 aaKnown RBP8.33□□□□□ -1.08
ECM1-201ENST00000346569 EDN2P20800 178 aa8.33□□□□□ -1.08
ECM1-201ENST00000346569 CNN1P51911 297 aaKnown RBP8.33□□□□□ -1.08
ECM1-201ENST00000346569 SYNJ2BPP57105 145 aa8.33□□□□□ -1.08
ECM1-201ENST00000346569 SRSF2Q01130 221 aaKnown RBP8.33□□□□□ -1.08
ECM1-201ENST00000346569 HIST2H2BDQ6DRA6 164 aa8.33□□□□□ -1.08
ECM1-201ENST00000346569 C1QL4Q86Z23 238 aa8.33□□□□□ -1.08
ECM1-201ENST00000346569 GRAMD2BQ96HH9 432 aa8.33□□□□□ -1.08
ECM1-201ENST00000346569 IGF2BP2-AS1Q96M15 143 aa8.33□□□□□ -1.08
ECM1-201ENST00000346569 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
ECM1-201ENST00000346569 TSSC4Q9Y5U2 329 aaPredicted RBP8.33□□□□□ -1.08
ECM1-201ENST00000346569 COL6A5A8TX70 2615 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 TRAV8-2A0A0B4J237 113 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 TRAV34A0A0B4J273 112 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 TRBV6-1A0A0K0K1D8 114 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 PGPEP1LA6NFU8 196 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 DIRC3C9JPN6 131 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 M0R3E3 92 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 ISLRO14498 428 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 TSPAN4O14817 238 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 IGLV2-11P01706 119 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 AKR1C3P42330 323 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 SLURP1P55000 103 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 KRTAP10-3P60369 221 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 ADIRFQ15847 76 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 DEFB136Q30KP8 78 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 ADAMTSL5Q6ZMM2 481 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 KLHL30-AS1Q8NEE0 82 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 DPF1Q92782 380 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 MLST8Q9BVC4 326 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 AAMDCQ9H7C9 122 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 TUBA4BQ9H853 241 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 TMEM242Q9NWH2 141 aa8.32□□□□□ -1.08
ECM1-201ENST00000346569 A0A1B0GUS0 222 aa8.31□□□□□ -1.08
ECM1-201ENST00000346569 C2orf70A6NJV1 201 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms