RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 SHISA9B4DS77 424 aa16.45■□□□□ 0.22
SPNS1-203ENST00000334536 TMEM178BH3BS89 294 aa16.45■□□□□ 0.22
SPNS1-203ENST00000334536 ETDBQ3ZM63 59 aa16.45■□□□□ 0.22
SPNS1-203ENST00000334536 SPANXA1Q9NS26 97 aa16.45■□□□□ 0.22
SPNS1-203ENST00000334536 ZNF329Q86UD4 541 aa16.44■□□□□ 0.22
SPNS1-203ENST00000334536 OR4C13Q8NGP0 309 aa16.44■□□□□ 0.22
SPNS1-203ENST00000334536 RNF183Q96D59 192 aa16.44■□□□□ 0.22
SPNS1-203ENST00000334536 PRO0461Q9UI25 63 aa16.44■□□□□ 0.22
SPNS1-203ENST00000334536 TNFRSF13BO14836 293 aaPredicted RBP16.43■□□□□ 0.22
SPNS1-203ENST00000334536 KLK10O43240 276 aa16.43■□□□□ 0.22
SPNS1-203ENST00000334536 UBE2L3P68036 154 aaKnown RBP16.43■□□□□ 0.22
SPNS1-203ENST00000334536 NDUFB3O43676 98 aa16.43■□□□□ 0.22
SPNS1-203ENST00000334536 CCL3L1P16619 93 aa16.43■□□□□ 0.22
SPNS1-203ENST00000334536 SUB1P53999 127 aaKnown RBP eCLIP16.43■□□□□ 0.22
SPNS1-203ENST00000334536 BCL6BQ8N143 479 aaPredicted RBP16.43■□□□□ 0.22
SPNS1-203ENST00000334536 ARPC1AQ92747 370 aa16.43■□□□□ 0.22
SPNS1-203ENST00000334536 RAX2Q96IS3 184 aa16.43■□□□□ 0.22
SPNS1-203ENST00000334536 CDIP1Q9H305 208 aa16.43■□□□□ 0.22
SPNS1-203ENST00000334536 APOHP02749 345 aaPredicted RBP16.42■□□□□ 0.22
SPNS1-203ENST00000334536 HLA-DRB4P13762 266 aa16.42■□□□□ 0.22
SPNS1-203ENST00000334536 BSPH1Q075Z2 132 aa16.42■□□□□ 0.22
SPNS1-203ENST00000334536 KLF12Q9Y4X4 402 aa16.42■□□□□ 0.22
SPNS1-203ENST00000334536 HLA-DRB4X5D2U9 266 aa16.42■□□□□ 0.22
SPNS1-203ENST00000334536 A0A1B0GW15 77 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 FBLL1A6NHQ2 334 aaKnown RBP16.41■□□□□ 0.22
SPNS1-203ENST00000334536 IGLL5B9A064 214 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 GCSHP23434 173 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 ATP5G2Q06055 141 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 MLANAQ16655 118 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 OR10X1Q8NGY0 326 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 C1QTNF4Q9BXJ3 329 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 TCRBV4S1A1TA0A5B7 111 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 C19orf71A6NCJ1 209 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 ZNF137PP52743 207 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 FXYD2P54710 66 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 TAL2Q16559 108 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 OR1L4Q8NGR5 311 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 ANAPC13Q9BS18 74 aa16.41■□□□□ 0.22
SPNS1-203ENST00000334536 FCN3O75636 299 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 P01737 135 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 SH2D6Q7Z4S9 175 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 FAM167A-AS1Q96KT0 104 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 MLST8Q9BVC4 326 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 AKAP13Q12802 2813 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 ZFHX4Q86UP3 3567 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 FOXI1Q12951 378 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 Q6ZUT4 128 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 LINC00479Q96M42 142 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 SLC25A2Q9BXI2 301 aa16.4■□□□□ 0.22
SPNS1-203ENST00000334536 APOMO95445 188 aa16.39■□□□□ 0.21
SPNS1-203ENST00000334536 COL8A2P25067 703 aa16.39■□□□□ 0.21
SPNS1-203ENST00000334536 THAP8Q8NA92 274 aa16.39■□□□□ 0.21
SPNS1-203ENST00000334536 KAAG1Q9UBP8 84 aa16.39■□□□□ 0.21
SPNS1-203ENST00000334536 IGLV2-23P01705 113 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 DLX6P56179 175 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 VMA21Q3ZAQ7 101 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 PGLYRP4Q96LB8 373 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 C18orf15Q96N68 181 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 CHAC1Q9BUX1 264 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 NPIPB6E9PJ23 425 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 ZNF138P52744 262 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 HERV-K104P63124 156 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 CEND1Q8N111 149 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 ZCCHC24Q8N2G6 241 aaKnown RBP16.38■□□□□ 0.21
SPNS1-203ENST00000334536 PRSS3P2Q8NHM4 247 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 TNFRSF18Q9Y5U5 241 aa16.38■□□□□ 0.21
SPNS1-203ENST00000334536 CGB1A6NKQ9 187 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 COX7A2P2O60397 106 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 MYCNOSP40205 109 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 SYT8Q8NBV8 401 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 CCL17Q92583 94 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 ZNF414Q96IQ9 312 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 SPTBN2O15020 2390 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 PLCE1Q9P212 2302 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 LOC400499M0QZD8 3231 aa16.37■□□□□ 0.21
SPNS1-203ENST00000334536 H3BMG7 143 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 GATA3P23771 443 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 NMUP48645 174 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 WT1-ASQ06250 92 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 LYPD2Q6UXB3 125 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 PCP2Q8IVA1 136 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 TMEM116Q8NCL8 245 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 OR8A1Q8NGG7 326 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 RNASE6Q93091 150 aaKnown RBP16.36■□□□□ 0.21
SPNS1-203ENST00000334536 C20orf78Q9BR46 151 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 NGBQ9NPG2 151 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 RALYQ9UKM9 306 aaKnown RBP16.36■□□□□ 0.21
SPNS1-203ENST00000334536 E7EUB6 86 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 LOXP28300 417 aaPredicted RBP16.36■□□□□ 0.21
SPNS1-203ENST00000334536 CACNG7P62955 275 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 TMEM155Q4W5P6 130 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 C10orf113Q5VZT2 155 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 FMC1Q96HJ9 113 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 TNCP24821 2201 aa16.36■□□□□ 0.21
SPNS1-203ENST00000334536 PRRC2CQ9Y520 2896 aaKnown RBP16.35■□□□□ 0.21
SPNS1-203ENST00000334536 GFRALQ6UXV0 394 aa16.35■□□□□ 0.21
SPNS1-203ENST00000334536 DCHS1Q96JQ0 3298 aa16.35■□□□□ 0.21
SPNS1-203ENST00000334536 CFAP47Q6ZTR5 3102 aa16.35■□□□□ 0.21
SPNS1-203ENST00000334536 A0A096LNJ9 63 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms