RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PAX8Q06710 450 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 SRSF6Q13247 344 aaKnown RBP12.89□□□□□ -0.35
UPK3B-202ENST00000334348 TIMM23BQ5SRD1 257 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 SAMD13Q5VXD3 122 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 LINC00311Q8N616 119 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 IGHV3-21A0A0B4J1V1 117 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 CRIP1P50238 77 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 LYZP61626 148 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 SAMD5Q5TGI4 173 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 ORMDL3Q8N138 153 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 PSG8Q9UQ74 426 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 ACACBO00763 2458 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 PIEZO2Q9H5I5 2752 aa12.89□□□□□ -0.35
UPK3B-202ENST00000334348 SERTM2A0A1B0GWG4 89 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 SMIM13P0DJ93 91 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 CT45A10P0DMU9 189 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 TCTAP57738 103 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 C8orf31Q8N9H6 132 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 RITA1Q96K30 269 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 TPPP3Q9BW30 176 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 RAI1Q7Z5J4 1906 aaPredicted RBP12.88□□□□□ -0.35
UPK3B-202ENST00000334348 K7EQM0 130 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 MC5RP33032 325 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 NMUP48645 174 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 TMEM200BQ69YZ2 307 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 PIFOQ8TCI5 191 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 URB1O60287 2271 aaKnown RBP12.88□□□□□ -0.35
UPK3B-202ENST00000334348 NAV3Q8IVL0 2385 aa12.88□□□□□ -0.35
UPK3B-202ENST00000334348 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
UPK3B-202ENST00000334348 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
UPK3B-202ENST00000334348 PSG3Q16557 428 aa12.87□□□□□ -0.35
UPK3B-202ENST00000334348 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
UPK3B-202ENST00000334348 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
UPK3B-202ENST00000334348 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
UPK3B-202ENST00000334348 SCGB1A1P11684 91 aa12.87□□□□□ -0.35
UPK3B-202ENST00000334348 PSMG4Q5JS54 123 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 AMN1Q8IY45 258 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 NGBQ9NPG2 151 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 NDUFS7O75251 213 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 RPL24P83731 157 aaKnown RBP12.86□□□□□ -0.35
UPK3B-202ENST00000334348 C1orf185Q5T7R7 199 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 LYZL1Q6UWQ5 148 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 LYPD1Q8N2G4 141 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 ASCL2Q99929 193 aa12.86□□□□□ -0.35
UPK3B-202ENST00000334348 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
UPK3B-202ENST00000334348 TMEM213A2RRL7 107 aa12.85□□□□□ -0.35
UPK3B-202ENST00000334348 NKX2-8O15522 239 aa12.85□□□□□ -0.35
UPK3B-202ENST00000334348 FXYD7P58549 80 aa12.85□□□□□ -0.35
UPK3B-202ENST00000334348 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
UPK3B-202ENST00000334348 HIGD1BQ9P298 99 aa12.85□□□□□ -0.35
UPK3B-202ENST00000334348 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
UPK3B-202ENST00000334348 TEX48A0A1B0GUV7 120 aa12.85□□□□□ -0.35
UPK3B-202ENST00000334348 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
UPK3B-202ENST00000334348 ENSAO43768 121 aaKnown RBP12.84□□□□□ -0.35
UPK3B-202ENST00000334348 GNG7O60262 68 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 FCN3O75636 299 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 APELAP0DMC3 54 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 C17orf77Q96MU5 243 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 DKK2Q9UBU2 259 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 PPIAL4CA0A0B4J2A2 164 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 SEM1Q6ZVN7 128 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 BCL6BQ8N143 479 aaPredicted RBP12.84□□□□□ -0.35
UPK3B-202ENST00000334348 SHANK2-AS3Q9BTD1 123 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 TMEM133Q9H2Q1 129 aa12.84□□□□□ -0.35
UPK3B-202ENST00000334348 K7EM74 188 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 NDUFS8O00217 210 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 THBDP07204 575 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 CRYGBP07316 175 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 FCGR2BP31994 310 aaPredicted RBP12.83□□□□□ -0.36
UPK3B-202ENST00000334348 FXYD2P54710 66 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 ZNF474Q6S9Z5 364 aaPredicted RBP12.83□□□□□ -0.36
UPK3B-202ENST00000334348 SIGMAR1Q99720 223 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 VGLL1Q99990 258 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 RASL11BQ9BPW5 248 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 MSRB2Q9Y3D2 182 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 MAP1BP46821 2468 aaKnown RBP12.83□□□□□ -0.36
UPK3B-202ENST00000334348 WI2-2373I1.2A0A1W2PRP0 233 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 SHISA9B4DS77 424 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 AZU1P20160 251 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 GCSHP23434 173 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 TM4SF20Q53R12 229 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 C8orf49Q96NF6 230 aa12.83□□□□□ -0.36
UPK3B-202ENST00000334348 ARFGEF3Q5TH69 2177 aa12.82□□□□□ -0.36
UPK3B-202ENST00000334348 MBD3L4A6NDZ8 208 aaPredicted RBP12.82□□□□□ -0.36
UPK3B-202ENST00000334348 MBD3L3A6NE82 208 aaPredicted RBP12.82□□□□□ -0.36
UPK3B-202ENST00000334348 MBD3L5A6NJ08 208 aaPredicted RBP12.82□□□□□ -0.36
UPK3B-202ENST00000334348 WT1P19544 449 aaPredicted RBP12.82□□□□□ -0.36
UPK3B-202ENST00000334348 MBD3L2Q8NHZ7 208 aaPredicted RBP12.82□□□□□ -0.36
UPK3B-202ENST00000334348 KALRNO60229 2985 aa12.82□□□□□ -0.36
UPK3B-202ENST00000334348 IGHV3-72A0A0B4J1Y9 119 aa12.81□□□□□ -0.36
UPK3B-202ENST00000334348 H3BRN7 92 aa12.81□□□□□ -0.36
UPK3B-202ENST00000334348 NPYP01303 97 aa12.81□□□□□ -0.36
UPK3B-202ENST00000334348 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
UPK3B-202ENST00000334348 CADP27708 2225 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms