RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 CACNA1EQ15878 2313 aa16.6■□□□□ 0.25
MTCL1-201ENST00000306329 ZNF664Q8N3J9 261 aa16.6■□□□□ 0.25
MTCL1-201ENST00000306329 DNAJC30Q96LL9 226 aa16.6■□□□□ 0.25
MTCL1-201ENST00000306329 NRXN2Q9P2S2 1712 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 STPG4Q8N801 248 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 SHANK2-AS3Q9BTD1 123 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 MSRB2Q9Y3D2 182 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 MDS2Q8NDY4 140 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 BRCA1P38398 1863 aaKnown RBP16.59■□□□□ 0.25
MTCL1-201ENST00000306329 TRIOBPQ9H2D6 2365 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 CEP250Q9BV73 2442 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 SYNJ2BPP57105 145 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 PSME4Q14997 1843 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 ADAMTSL5Q6ZMM2 481 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 KLF12Q9Y4X4 402 aa16.59■□□□□ 0.25
MTCL1-201ENST00000306329 GVINP1Q7Z2Y8 2422 aa16.58■□□□□ 0.25
MTCL1-201ENST00000306329 DAZ1Q9NQZ3 744 aaKnown RBP16.58■□□□□ 0.25
MTCL1-201ENST00000306329 SAA4P35542 130 aa16.58■□□□□ 0.24
MTCL1-201ENST00000306329 EP300Q09472 2414 aaPredicted RBP16.57■□□□□ 0.24
MTCL1-201ENST00000306329 DEFB131AP59861 70 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 DKK1O94907 266 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 FREM3P0C091 2139 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 PLXNA1Q9UIW2 1896 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 KNCNA6PVL3 124 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 CD5LO43866 347 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 GFRA4Q9GZZ7 299 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 TMEM213A2RRL7 107 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 BPESC1Q9GZL8 116 aa16.57■□□□□ 0.24
MTCL1-201ENST00000306329 GAGE12BA1L429 117 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 MBD3L4A6NDZ8 208 aaPredicted RBP16.56■□□□□ 0.24
MTCL1-201ENST00000306329 MBD3L3A6NE82 208 aaPredicted RBP16.56■□□□□ 0.24
MTCL1-201ENST00000306329 MBD3L5A6NJ08 208 aaPredicted RBP16.56■□□□□ 0.24
MTCL1-201ENST00000306329 LYL1P12980 280 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 TRPT1Q86TN4 253 aaKnown RBP16.56■□□□□ 0.24
MTCL1-201ENST00000306329 MBD3L2Q8NHZ7 208 aaPredicted RBP16.56■□□□□ 0.24
MTCL1-201ENST00000306329 RNF166Q96A37 237 aaPredicted RBP16.56■□□□□ 0.24
MTCL1-201ENST00000306329 ADCYAP1P18509 176 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 C17orf82Q86X59 251 aaPredicted RBP16.56■□□□□ 0.24
MTCL1-201ENST00000306329 B3GALT5-AS1P59052 145 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 Q6ZS49 121 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 IL17RELQ6ZVW7 336 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 ZNRD1Q9P1U0 126 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 DOPEY2Q9Y3R5 2298 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 A0A1W2PPI3 338 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 SPINK8P0C7L1 97 aa16.56■□□□□ 0.24
MTCL1-201ENST00000306329 FNDC10F2Z333 226 aa16.55■□□□□ 0.24
MTCL1-201ENST00000306329 NDUFS6O75380 124 aaKnown RBP16.55■□□□□ 0.24
MTCL1-201ENST00000306329 MPDZO75970 2070 aa16.55■□□□□ 0.24
MTCL1-201ENST00000306329 TP53TG1Q9Y2A0 90 aa16.55■□□□□ 0.24
MTCL1-201ENST00000306329 NYNRINQ9P2P1 1898 aaKnown RBP16.54■□□□□ 0.24
MTCL1-201ENST00000306329 TET1Q8NFU7 2136 aa16.54■□□□□ 0.24
MTCL1-201ENST00000306329 C8orf49Q96NF6 230 aa16.54■□□□□ 0.24
MTCL1-201ENST00000306329 CFHR2P36980 270 aa16.54■□□□□ 0.24
MTCL1-201ENST00000306329 PDE6HQ13956 83 aa16.53■□□□□ 0.24
MTCL1-201ENST00000306329 CRIPAKQ8N1N5 446 aa16.53■□□□□ 0.24
MTCL1-201ENST00000306329 LOC285556D6RIA3 1793 aa16.53■□□□□ 0.24
MTCL1-201ENST00000306329 RUSC1-AS1Q66K80 236 aa16.53■□□□□ 0.24
MTCL1-201ENST00000306329 RPL32P62910 135 aaKnown RBP16.52■□□□□ 0.24
MTCL1-201ENST00000306329 SRSF8Q9BRL6 282 aaKnown RBP16.52■□□□□ 0.24
MTCL1-201ENST00000306329 GAGE12JA6NER3 117 aa16.52■□□□□ 0.24
MTCL1-201ENST00000306329 GAGE1Q13065 139 aa16.52■□□□□ 0.24
MTCL1-201ENST00000306329 GAGE4Q13068 117 aa16.52■□□□□ 0.24
MTCL1-201ENST00000306329 GAGE5Q13069 117 aa16.52■□□□□ 0.24
MTCL1-201ENST00000306329 LINC01356Q8N9X3 169 aa16.52■□□□□ 0.24
MTCL1-201ENST00000306329 CFHR3Q02985 330 aa16.52■□□□□ 0.23
MTCL1-201ENST00000306329 TMEM75Q8N9X5 138 aa16.52■□□□□ 0.23
MTCL1-201ENST00000306329 A0A1B0GUS0 222 aa16.52■□□□□ 0.23
MTCL1-201ENST00000306329 EREGO14944 169 aa16.52■□□□□ 0.23
MTCL1-201ENST00000306329 MRPL52Q86TS9 123 aaKnown RBP16.52■□□□□ 0.23
MTCL1-201ENST00000306329 HS3ST6Q96QI5 342 aa16.52■□□□□ 0.23
MTCL1-201ENST00000306329 ZNF114Q8NC26 417 aa16.51■□□□□ 0.23
MTCL1-201ENST00000306329 XCL2Q9UBD3 114 aa16.51■□□□□ 0.23
MTCL1-201ENST00000306329 IGHV3-16A0A0C4DH30 117 aa16.51■□□□□ 0.23
MTCL1-201ENST00000306329 RALGAPA2Q2PPJ7 1873 aa16.51■□□□□ 0.23
MTCL1-201ENST00000306329 POLR3KQ9Y2Y1 108 aaPredicted RBP16.51■□□□□ 0.23
MTCL1-201ENST00000306329 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
MTCL1-201ENST00000306329 ATP6V0E1O15342 81 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 E7EQL1 145 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 NEGR1Q7Z3B1 354 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 COX11Q9Y6N1 276 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 Q0VG73 95 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 SPINK13Q1W4C9 94 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 SBF2Q86WG5 1849 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 PMVKQ15126 192 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 KLK9Q9UKQ9 250 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 ZNF492Q9P255 531 aa16.5■□□□□ 0.23
MTCL1-201ENST00000306329 FOXL2NBQ6ZUU3 175 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 C2orf66Q6UXQ4 117 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 CITED2Q99967 270 aaPredicted RBP16.49■□□□□ 0.23
MTCL1-201ENST00000306329 SLC25A16P16260 332 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 TCF15Q12870 199 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 C18orf32Q8TCD1 76 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 IGHG3P01860 377 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 RNF114Q9Y508 228 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 GREB1Q4ZG55 1949 aa16.49■□□□□ 0.23
MTCL1-201ENST00000306329 SNHG12Q9BXW3 62 aa16.48■□□□□ 0.23
MTCL1-201ENST00000306329 IGKV1-6A0A0C4DH72 117 aa16.48■□□□□ 0.23
MTCL1-201ENST00000306329 PFN1P07737 140 aaKnown RBP16.48■□□□□ 0.23
MTCL1-201ENST00000306329 NDUFB8O95169 186 aa16.48■□□□□ 0.23
MTCL1-201ENST00000306329 FAM231BA6NCW3 169 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms