RNA–Protein interactions for RNA: ENST00000276974.7

CNTNAP3B-201, Transcript of contactin associated protein like 3B, humanhuman

TSL 5 BASIC

Gene CNTNAP3B, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-201ENST00000276974 Q8NA96 180 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 NGBQ9NPG2 151 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 MAP1AP78559 2803 aaPredicted RBP13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 CRYGBP07316 175 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 LOXL1Q08397 574 aaPredicted RBP13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 WFDC3Q8IUB2 231 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 A0A1B0GUT8 65 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 NCR2O95944 276 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 OR8A1Q8NGG7 326 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 PRSS3P2Q8NHM4 247 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 MAP1LC3CQ9BXW4 147 aa13.34□□□□□ -0.27
CNTNAP3B-201ENST00000276974 TMEM213A2RRL7 107 aa13.33□□□□□ -0.28
CNTNAP3B-201ENST00000276974 HSBP1L1C9JCN9 74 aa13.33□□□□□ -0.28
CNTNAP3B-201ENST00000276974 CRIP1P50238 77 aa13.33□□□□□ -0.28
CNTNAP3B-201ENST00000276974 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.28
CNTNAP3B-201ENST00000276974 MUC15Q8N387 334 aa13.33□□□□□ -0.28
CNTNAP3B-201ENST00000276974 PSG8Q9UQ74 426 aa13.33□□□□□ -0.28
CNTNAP3B-201ENST00000276974 ZNF492Q9P255 531 aa13.33□□□□□ -0.28
CNTNAP3B-201ENST00000276974 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 K7EIM0 57 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 HLA-DRB1P01911 266 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 TMEM191AQ9H0A3 160 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 TRBV19A0A075B6N1 114 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 OR2T8A6NH00 312 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SLC25A34Q6PIV7 304 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 OR4C5Q8NGB2 326 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 Q8TAT8 98 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 ORAOV1Q8WV07 137 aa13.32□□□□□ -0.28
CNTNAP3B-201ENST00000276974 COL12A1Q99715 3063 aa13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 IGKV2-40A0A087WW87 121 aaPredicted RBP13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SMKR1H3BMG3 65 aa13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 IGKV2D-40P01614 121 aaPredicted RBP13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 IFI27P40305 119 aaPredicted RBP13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 KAAG1Q9UBP8 84 aa13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 UBE2V1Q13404 147 aa13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 CHCHD1Q96BP2 118 aaKnown RBP13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 RNF125Q96EQ8 232 aa13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 AP5S1Q9NUS5 200 aa13.31□□□□□ -0.28
CNTNAP3B-201ENST00000276974 LIPFP07098 398 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 OR5AL1P0C617 328 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 FA2HQ7L5A8 372 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 NEU4Q8WWR8 484 aaPredicted RBP13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 NCBP2LA6PVI3 153 aaKnown RBP13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 GNG7O60262 68 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 CD3EP07766 207 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 APOBEC3AP31941 199 aaPredicted RBP13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SIGLEC15Q6ZMC9 328 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 AMN1Q8IY45 258 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 ZNF491Q8N8L2 437 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 C8orf31Q8N9H6 132 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 HLA-DMBP28068 263 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 CT83Q5H943 113 aa13.3□□□□□ -0.28
CNTNAP3B-201ENST00000276974 UQCRFS1P47985 274 aa13.29□□□□□ -0.28
CNTNAP3B-201ENST00000276974 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
CNTNAP3B-201ENST00000276974 D6R8Y8 96 aa13.29□□□□□ -0.28
CNTNAP3B-201ENST00000276974 PLP1P60201 277 aa13.29□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
CNTNAP3B-201ENST00000276974 LOC105371242A0A075B767 164 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 NPIPB6E9PJ23 425 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 HAX1O00165 279 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 RBPJQ06330 500 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 LYZL1Q6UWQ5 148 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 NAA38Q9BRA0 125 aaKnown RBP13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 COTL1Q14019 142 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 TMEM75Q8N9X5 138 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SMIM12Q96EX1 92 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SPOCK3Q9BQ16 436 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 HRNRQ86YZ3 2850 aaPredicted RBP13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 RIGQ13278 110 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 GFRA4Q9GZZ7 299 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 ST20Q9HBF5 79 aa13.28□□□□□ -0.28
CNTNAP3B-201ENST00000276974 OVOL3O00110 214 aa13.27□□□□□ -0.28
CNTNAP3B-201ENST00000276974 CT45A10P0DMU9 189 aa13.27□□□□□ -0.28
CNTNAP3B-201ENST00000276974 PSG3Q16557 428 aa13.27□□□□□ -0.28
CNTNAP3B-201ENST00000276974 SOX21Q9Y651 276 aaPredicted RBP13.27□□□□□ -0.28
CNTNAP3B-201ENST00000276974 CELSR1Q9NYQ6 3014 aa13.27□□□□□ -0.29
CNTNAP3B-201ENST00000276974 ZNF672Q499Z4 452 aaPredicted RBP13.27□□□□□ -0.29
CNTNAP3B-201ENST00000276974 BVES-AS1Q5T3Y7 98 aa13.27□□□□□ -0.29
CNTNAP3B-201ENST00000276974 FAM162BQ5T6X4 162 aa13.27□□□□□ -0.29
CNTNAP3B-201ENST00000276974 ZNF414Q96IQ9 312 aa13.27□□□□□ -0.29
CNTNAP3B-201ENST00000276974 PVRIGQ6DKI7 326 aa13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 NPIPB5A8MRT5 1133 aa13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 H3BRN7 92 aa13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 K7EQM0 130 aa13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 CRXO43186 299 aaPredicted RBP13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 PPIFP30405 207 aaKnown RBP13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 AMMECR1LQ6DCA0 310 aa13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 HSPB8Q9UJY1 196 aa13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 IGHV3-66A0A0C4DH42 116 aa13.26□□□□□ -0.29
CNTNAP3B-201ENST00000276974 TAX1BP3O14907 124 aa13.25□□□□□ -0.29
CNTNAP3B-201ENST00000276974 TMEM14CQ9P0S9 112 aa13.25□□□□□ -0.29
CNTNAP3B-201ENST00000276974 ZFHX3Q15911 3703 aa13.25□□□□□ -0.29
CNTNAP3B-201ENST00000276974 B9A039 149 aa13.25□□□□□ -0.29
CNTNAP3B-201ENST00000276974 NBR2O15453 112 aa13.25□□□□□ -0.29
CNTNAP3B-201ENST00000276974 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
CNTNAP3B-201ENST00000276974 C1RLQ9NZP8 487 aa13.25□□□□□ -0.29
CNTNAP3B-201ENST00000276974 JKAMPQ9P055 326 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms