RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 KAAG1Q9UBP8 84 aa13.49□□□□□ -0.25
FOXA1-201ENST00000250448 TP73-AS1Q9UF72 201 aa13.49□□□□□ -0.25
FOXA1-201ENST00000250448 CRYGCP07315 174 aa13.49□□□□□ -0.25
FOXA1-201ENST00000250448 POLQO75417 2590 aa13.48□□□□□ -0.25
FOXA1-201ENST00000250448 A1L4Q6 167 aa13.48□□□□□ -0.25
FOXA1-201ENST00000250448 RBPMS2Q6ZRY4 209 aaKnown RBP13.48□□□□□ -0.25
FOXA1-201ENST00000250448 LEPROTL1O95214 131 aa13.48□□□□□ -0.25
FOXA1-201ENST00000250448 TCRAP04437 139 aa13.48□□□□□ -0.25
FOXA1-201ENST00000250448 FBLN7Q53RD9 439 aa13.48□□□□□ -0.25
FOXA1-201ENST00000250448 GFRA4Q9GZZ7 299 aa13.48□□□□□ -0.25
FOXA1-201ENST00000250448 Q9H3A6 140 aa13.48□□□□□ -0.25
FOXA1-201ENST00000250448 H3BTX0 84 aa13.47□□□□□ -0.25
FOXA1-201ENST00000250448 ZNF137PP52743 207 aa13.47□□□□□ -0.25
FOXA1-201ENST00000250448 SRSF1Q07955 248 aaKnown RBP eCLIP13.47□□□□□ -0.25
FOXA1-201ENST00000250448 HCP5Q6MZN7 132 aa13.47□□□□□ -0.25
FOXA1-201ENST00000250448 LINC00311Q8N616 119 aa13.47□□□□□ -0.25
FOXA1-201ENST00000250448 DAZAP1Q96EP5 407 aaKnown RBP13.47□□□□□ -0.25
FOXA1-201ENST00000250448 IGHV2-70DA0A0C4DH43 119 aa13.47□□□□□ -0.25
FOXA1-201ENST00000250448 hDV102S1A0JD36 115 aa13.47□□□□□ -0.25
FOXA1-201ENST00000250448 MRGPRG-AS1Q2M3A8 158 aa13.47□□□□□ -0.25
FOXA1-201ENST00000250448 LOC105371242A0A075B767 164 aa13.46□□□□□ -0.25
FOXA1-201ENST00000250448 CHEK1O14757 476 aa13.46□□□□□ -0.25
FOXA1-201ENST00000250448 RITA1Q96K30 269 aa13.46□□□□□ -0.25
FOXA1-201ENST00000250448 TMEM191AQ9H0A3 160 aa13.46□□□□□ -0.25
FOXA1-201ENST00000250448 PVRIGQ6DKI7 326 aa13.46□□□□□ -0.26
FOXA1-201ENST00000250448 Q86TA4 180 aa13.46□□□□□ -0.26
FOXA1-201ENST00000250448 C8orf31Q8N9H6 132 aa13.46□□□□□ -0.26
FOXA1-201ENST00000250448 NEU4Q8WWR8 484 aaPredicted RBP13.46□□□□□ -0.26
FOXA1-201ENST00000250448 TMEM155Q4W5P6 130 aa13.45□□□□□ -0.26
FOXA1-201ENST00000250448 MPV17L2Q567V2 206 aa13.45□□□□□ -0.26
FOXA1-201ENST00000250448 PLXNB1O43157 2135 aa13.45□□□□□ -0.26
FOXA1-201ENST00000250448 DLX6P56179 175 aa13.45□□□□□ -0.26
FOXA1-201ENST00000250448 IGHV3-21A0A0B4J1V1 117 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 FAM231BA6NCW3 169 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 LIPFP07098 398 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 TIMD4Q96H15 378 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 NDFIP1Q9BT67 221 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 MC5RP33032 325 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 SCGB2A2Q13296 93 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 SLC25A34Q6PIV7 304 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 TMEM116Q8NCL8 245 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 OR4C5Q8NGB2 326 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 NRGNQ92686 78 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 FBN2P35556 2912 aa13.44□□□□□ -0.26
FOXA1-201ENST00000250448 USP9YO00507 2555 aaPredicted RBP13.43□□□□□ -0.26
FOXA1-201ENST00000250448 ENSAO43768 121 aaKnown RBP13.43□□□□□ -0.26
FOXA1-201ENST00000250448 OR5AL1P0C617 328 aa13.43□□□□□ -0.26
FOXA1-201ENST00000250448 RPL27AP46776 148 aaKnown RBP13.43□□□□□ -0.26
FOXA1-201ENST00000250448 C8orf46Q8TAG6 207 aa13.43□□□□□ -0.26
FOXA1-201ENST00000250448 COL8A1P27658 744 aa13.43□□□□□ -0.26
FOXA1-201ENST00000250448 PLP1P60201 277 aa13.43□□□□□ -0.26
FOXA1-201ENST00000250448 VAMP3Q15836 100 aa13.43□□□□□ -0.26
FOXA1-201ENST00000250448 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
FOXA1-201ENST00000250448 TRAV8-1A0A0A6YYK1 113 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 IGHV3-72A0A0B4J1Y9 119 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 APELAP0DMC3 54 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 PPIAL4GP0DN37 164 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 IGHV1-8P0DP01 117 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 LGALS7P47929 136 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 PET117Q6UWS5 81 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 CIARTQ8N365 385 aaPredicted RBP13.42□□□□□ -0.26
FOXA1-201ENST00000250448 MAP1LC3CQ9BXW4 147 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 HIGD1AQ9Y241 93 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 HAX1O00165 279 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 BVES-AS1Q5T3Y7 98 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 ONECUT1Q9UBC0 465 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 ABCA12Q86UK0 2595 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 TENM4Q6N022 2769 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 CELSR1Q9NYQ6 3014 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 NUDT3O95989 172 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 APOHP02749 345 aaPredicted RBP13.42□□□□□ -0.26
FOXA1-201ENST00000250448 ZNF138P52744 262 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 TEX45Q8NA69 505 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
FOXA1-201ENST00000250448 KMT2BQ9UMN6 2715 aaPredicted RBP13.41□□□□□ -0.26
FOXA1-201ENST00000250448 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.41□□□□□ -0.26
FOXA1-201ENST00000250448 TAX1BP3O14907 124 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 COX7A1P24310 79 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 RIPPLY3P57055 190 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 PTPN13Q12923 2485 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 PF4V1P10720 104 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 LYZP61626 148 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 ERASQ7Z444 233 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 PRNTQ86SH4 94 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 HSPB8Q9UJY1 196 aa13.41□□□□□ -0.26
FOXA1-201ENST00000250448 CSMD1Q96PZ7 3565 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 EFNA4P52798 201 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 ARF6P62330 175 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 GOLT1AQ6ZVE7 132 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 Q71RC1 249 aaPredicted RBP13.4□□□□□ -0.26
FOXA1-201ENST00000250448 IGFBPL1Q8WX77 278 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 IGLV2-11P01706 119 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 HTR1DP28221 377 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 PAX2Q02962 417 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 ZNF48Q96MX3 618 aaPredicted RBP13.4□□□□□ -0.26
FOXA1-201ENST00000250448 TMUB1Q9BVT8 246 aa13.4□□□□□ -0.26
FOXA1-201ENST00000250448 TOX4O94842 621 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms