RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 MRPL23Q16540 153 aaKnown RBP7.52□□□□□ -1.21
SRSF6-201ENST00000244020 SH2D6Q7Z4S9 175 aa7.52□□□□□ -1.21
SRSF6-201ENST00000244020 ZNF329Q86UD4 541 aa7.52□□□□□ -1.21
SRSF6-201ENST00000244020 IGKV1D-17A0A075B6S4 117 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 FNDC10F2Z333 226 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 UPK2O00526 184 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 NTN3O00634 580 aaPredicted RBP7.51□□□□□ -1.21
SRSF6-201ENST00000244020 FAM201AQ5SY85 155 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 GPR82Q96P67 336 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 MS4A6AQ9H2W1 248 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 TTC28Q96AY4 2481 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 C22orf46C9J442 243 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 DLL1O00548 723 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 IGKV1-16P04430 117 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 SCGB3A1Q96QR1 104 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 TNRC6BQ9UPQ9 1833 aaKnown RBP7.51□□□□□ -1.21
SRSF6-201ENST00000244020 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 ZNF56Q15929 161 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 PEAR1Q5VY43 1037 aaPredicted RBP7.51□□□□□ -1.21
SRSF6-201ENST00000244020 ORMDL3Q8N138 153 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 OR9G4Q8NGQ1 327 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 NPFFR1Q9GZQ6 430 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 DSCAML1Q8TD84 2053 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 TET2Q6N021 2002 aaPredicted RBP7.51□□□□□ -1.21
SRSF6-201ENST00000244020 ZNF815PA8K554 130 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 KLF12Q9Y4X4 402 aa7.51□□□□□ -1.21
SRSF6-201ENST00000244020 C9JAW5 83 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 NKX2-8O15522 239 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 UTF1Q5T230 341 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 C1orf229Q6ZS94 237 aaPredicted RBP7.5□□□□□ -1.21
SRSF6-201ENST00000244020 DLX4Q92988 240 aaPredicted RBP7.5□□□□□ -1.21
SRSF6-201ENST00000244020 IGHV3OR16-13A0A075B7E8 117 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 IGHV3-74A0A0B4J1X5 117 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 HBDP02042 147 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 NBEAP1P0C6P0 100 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 CECR9P0C854 216 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 PF4V1P10720 104 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
SRSF6-201ENST00000244020 HIST1H4AP62805 103 aaKnown RBP7.5□□□□□ -1.21
SRSF6-201ENST00000244020 C3orf36Q3SXR2 165 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 RBPMS2Q6ZRY4 209 aaKnown RBP7.5□□□□□ -1.21
SRSF6-201ENST00000244020 CACNG8Q8WXS5 425 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 ABHD17AQ96GS6 310 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.5□□□□□ -1.21
SRSF6-201ENST00000244020 SAA1P0DJI8 122 aaPredicted RBP7.5□□□□□ -1.21
SRSF6-201ENST00000244020 FAM74A4Q5TZK3 123 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 C16orf54Q6UWD8 224 aa7.5□□□□□ -1.21
SRSF6-201ENST00000244020 C9orf118A6NHY6 69 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 F2RL2O00254 374 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 RNASE2P10153 161 aaKnown RBP7.49□□□□□ -1.21
SRSF6-201ENST00000244020 PMS2CLQ68D20 193 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 FAM90A1Q86YD7 464 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 MAFAQ8NHW3 353 aaPredicted RBP7.49□□□□□ -1.21
SRSF6-201ENST00000244020 DDB2Q92466 427 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 MBD6Q96DN6 1003 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 RAX2Q96IS3 184 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 FAM167A-AS1Q96KT0 104 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 IGHV3-64A0A075B6Q5 118 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 K7ERJ3 54 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 NCR2O95944 276 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 ATP5IP56385 69 aaPredicted RBP7.49□□□□□ -1.21
SRSF6-201ENST00000244020 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.49□□□□□ -1.21
SRSF6-201ENST00000244020 CCL17Q92583 94 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 PCNX1Q96RV3 2341 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 GPR179Q6PRD1 2367 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 M0R381 172 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 DPM2O94777 84 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 ZC2HC1BQ5TFG8 222 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 Q6ZT83 130 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 GCSAMQ8N6F7 178 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 SCNM1Q9BWG6 230 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 SCRT2Q9NQ03 307 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 YAE1D1Q9NRH1 226 aa7.49□□□□□ -1.21
SRSF6-201ENST00000244020 SRRM4A7MD48 611 aaKnown RBP7.48□□□□□ -1.21
SRSF6-201ENST00000244020 SRRM5B3KS81 715 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 ATP5LO75964 103 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 ZNRD1Q9P1U0 126 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 SPRR3Q9UBC9 169 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 PSMB11A5LHX3 300 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 K7EP34 96 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 SARAFQ96BY9 339 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 VWC2LB2RUY7 222 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 RS1O15537 224 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 WISP2O76076 250 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 URB1-AS1Q96HZ7 61 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 MFAP4P55083 255 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 NPC2P61916 151 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 ZNF714Q96N38 554 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 CCL13Q99616 98 aa7.48□□□□□ -1.21
SRSF6-201ENST00000244020 CHTOPQ9Y3Y2 248 aaKnown RBP7.48□□□□□ -1.21
SRSF6-201ENST00000244020 WDFY4Q6ZS81 3184 aa7.47□□□□□ -1.21
SRSF6-201ENST00000244020 IGKV3OR2-268A0A0C4DH90 116 aa7.47□□□□□ -1.21
SRSF6-201ENST00000244020 TCRBV4S1A1TA0A5B7 111 aa7.47□□□□□ -1.21
SRSF6-201ENST00000244020 NPIPB5A8MRT5 1133 aa7.47□□□□□ -1.21
SRSF6-201ENST00000244020 TMEM105Q8N8V8 129 aa7.47□□□□□ -1.21
SRSF6-201ENST00000244020 PHLDA3Q9Y5J5 127 aa7.47□□□□□ -1.21
SRSF6-201ENST00000244020 IGKV3D-20A0A0C4DH25 116 aa7.47□□□□□ -1.21
SRSF6-201ENST00000244020 NDUFB3O43676 98 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms