RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SFTA3P0C7M3 94 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 RPL35AP18077 110 aaKnown RBP10.07□□□□□ -0.8
VEGFA-201ENST00000230480 SULT1A2P50226 295 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 RAB5CP51148 216 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 NHLH2Q02577 135 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 MORN5Q5VZ52 161 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 STXBP6Q8NFX7 210 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 C2CD4CQ8TF44 421 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 GGACTQ9BVM4 153 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 WDR83OSQ9Y284 106 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 RYR2Q92736 4967 aa10.07□□□□□ -0.8
VEGFA-201ENST00000230480 KNCNA6PVL3 124 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 H3BRN7 92 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 SCGB2A1O75556 95 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 ZNF688P0C7X2 276 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 S100A10P60903 97 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.83e-7■■■□□ 16.6
VEGFA-201ENST00000230480 AKR1C1Q04828 323 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 RHEBQ15382 184 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 SIGLEC15Q6ZMC9 328 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 LYPD6BQ8NI32 183 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 TMEM37Q8WXS4 190 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 GRAMD2BQ96HH9 432 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 TMEM231Q9H6L2 316 aa10.06□□□□□ -0.8
VEGFA-201ENST00000230480 TRAV8-2A0A0B4J237 113 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 SMCO3A2RU48 225 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 HELTA6NFD8 242 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 AGPAT2O15120 278 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 SULT1A1P50225 295 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 RAB2AP61019 212 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 RPL11P62913 178 aaKnown RBP10.05□□□□□ -0.8
VEGFA-201ENST00000230480 PRR20EP86478 221 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 PRR20CP86479 221 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 PRR20DP86480 221 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 PRR20BP86481 221 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 PRR20AP86496 221 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 LRRC37A5PQ49AS3 106 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 C1orf194Q5T5A4 169 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 TRPT1Q86TN4 253 aaKnown RBP10.05□□□□□ -0.8
VEGFA-201ENST00000230480 ZFP82Q8N141 532 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 TMEM217Q8N7C4 229 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 TMED6Q8WW62 240 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 UHRF2Q96PU4 802 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 SHANK2-AS3Q9BTD1 123 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 SCRT1Q9BWW7 348 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 DOK5Q9P104 306 aa10.05□□□□□ -0.8
VEGFA-201ENST00000230480 KIR2DL5BA0A0G2JN68 375 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 KIR2DL5BA0A0G2JPC4 375 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 ORM2P19652 201 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 BMI1P35226 326 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 VAMP2P63027 116 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 PAFAH1B2P68402 229 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
VEGFA-201ENST00000230480 FABP9Q0Z7S8 132 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 TEPPQ6URK8 271 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 KIR2DL5AQ8N109 375 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 KIR2DL5BQ8NHK3 375 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 SLC25A39Q9BZJ4 359 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-201ENST00000230480 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
VEGFA-201ENST00000230480 RAB5AP20339 215 aa10.03□□□□□ -0.8
VEGFA-201ENST00000230480 CMC4P56277 68 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-201ENST00000230480 MIC13Q5XKP0 118 aa10.03□□□□□ -0.8
VEGFA-201ENST00000230480 Q6ZWC4 215 aa10.03□□□□□ -0.8
VEGFA-201ENST00000230480 OR1B1Q8NGR6 318 aa10.03□□□□□ -0.8
VEGFA-201ENST00000230480 RNF183Q96D59 192 aa10.03□□□□□ -0.8
VEGFA-201ENST00000230480 SEPSECSQ9HD40 501 aaKnown RBP10.03□□□□□ -0.8
VEGFA-201ENST00000230480 PPT1P50897 306 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 SELENOTP62341 195 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 DEFB135Q30KP9 77 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 PSMG4Q5JS54 123 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 IGFL4Q6B9Z1 124 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 CSNK1G2-AS1Q8NCQ2 148 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 LYSTQ99698 3801 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 HRH4Q9H3N8 390 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 WFDC1Q9HC57 220 aa10.02□□□□□ -0.81
VEGFA-201ENST00000230480 E5RGE8 158 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 H3BMM0 161 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 HYPMO75409 117 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 JTBO76095 146 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 STX12Q86Y82 276 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 OR8I2Q8N0Y5 310 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 RSG1Q9BU20 258 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 TMEM147Q9BVK8 224 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 CSTL1Q9H114 145 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 ARV1Q9H2C2 271 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 RFNGQ9Y644 331 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 HYDINQ4G0P3 5121 aa10.01□□□□□ -0.81
VEGFA-201ENST00000230480 TRAV5A0A0B4J249 113 aa10□□□□□ -0.81
VEGFA-201ENST00000230480 C7orf77A4D0Y5 90 aa10□□□□□ -0.81
VEGFA-201ENST00000230480 F6UB75 175 aa10□□□□□ -0.81
VEGFA-201ENST00000230480 HOXA5P20719 270 aa10□□□□□ -0.81
VEGFA-201ENST00000230480 HLA-DMBP28068 263 aa10□□□□□ -0.81
VEGFA-201ENST00000230480 CAMLGP49069 296 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms