RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 Q9H3A6 140 aa13.33□□□□□ -0.28
CHGA-201ENST00000216492 TMEM14CQ9P0S9 112 aa13.33□□□□□ -0.28
CHGA-201ENST00000216492 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
CHGA-201ENST00000216492 CELSR1Q9NYQ6 3014 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 ATP5L2Q7Z4Y8 100 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 FAM103A1Q9BTL3 118 aaKnown RBP13.32□□□□□ -0.28
CHGA-201ENST00000216492 WNT10AQ9GZT5 417 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 TCRAP04437 139 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 AMTP48728 403 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 TEX43Q6ZNM6 134 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 PIFOQ8TCI5 191 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 OTORQ9NRC9 128 aa13.32□□□□□ -0.28
CHGA-201ENST00000216492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHGA-201ENST00000216492 LTAP01374 205 aa13.31□□□□□ -0.28
CHGA-201ENST00000216492 SLC25A39Q9BZJ4 359 aaPredicted RBP13.31□□□□□ -0.28
CHGA-201ENST00000216492 GSX1Q9H4S2 264 aaPredicted RBP13.31□□□□□ -0.28
CHGA-201ENST00000216492 RPP21Q9H633 154 aaKnown RBP13.31□□□□□ -0.28
CHGA-201ENST00000216492 HIGD1CA8MV81 97 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 CT83Q5H943 113 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 LEMD1Q68G75 181 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 WFDC11Q8NEX6 87 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 ARPC1AQ92747 370 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 MLST8Q9BVC4 326 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 ZNF492Q9P255 531 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 RNF24Q9Y225 148 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 PRRC2AP48634 2157 aaKnown RBP13.3□□□□□ -0.28
CHGA-201ENST00000216492 A0A1W2PS18 150 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 SLAQ13239 276 aa13.3□□□□□ -0.28
CHGA-201ENST00000216492 MRPL27Q9P0M9 148 aaKnown RBP13.3□□□□□ -0.28
CHGA-201ENST00000216492 IGHV7-81A0A0B4J1V7 117 aa13.29□□□□□ -0.28
CHGA-201ENST00000216492 ZNF324O75467 553 aaPredicted RBP13.29□□□□□ -0.28
CHGA-201ENST00000216492 P01737 135 aa13.29□□□□□ -0.28
CHGA-201ENST00000216492 CD33P20138 364 aa13.29□□□□□ -0.28
CHGA-201ENST00000216492 VN1R17PQ8TDU5 208 aa13.29□□□□□ -0.28
CHGA-201ENST00000216492 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
CHGA-201ENST00000216492 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
CHGA-201ENST00000216492 ABCA1O95477 2261 aa13.29□□□□□ -0.28
CHGA-201ENST00000216492 A8MWL6 223 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 HLA-DRB1P01911 266 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 PMCHP20382 165 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 KRTDAPP60985 99 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 ASPHD1Q5U4P2 390 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 CYB5R2Q6BCY4 276 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 TMEM219Q86XT9 240 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 RCHY1Q96PM5 261 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 C20orf144Q9BQM9 153 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 VAMP8Q9BV40 100 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 NRN1Q9NPD7 142 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 GCN1Q92616 2671 aaKnown RBP13.28□□□□□ -0.28
CHGA-201ENST00000216492 NDPQ00604 133 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 S100A7AQ86SG5 101 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 FBXL7Q9UJT9 491 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 ZFHX3Q15911 3703 aa13.28□□□□□ -0.28
CHGA-201ENST00000216492 H3BTX0 84 aa13.27□□□□□ -0.28
CHGA-201ENST00000216492 K7EIM0 57 aa13.27□□□□□ -0.28
CHGA-201ENST00000216492 PRSS22Q9GZN4 317 aa13.27□□□□□ -0.28
CHGA-201ENST00000216492 OR2J3O76001 311 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 IGKV1-17P01599 117 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 EGR2P11161 476 aaPredicted RBP13.27□□□□□ -0.29
CHGA-201ENST00000216492 HBBP68871 147 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 KLF5Q13887 457 aaPredicted RBP13.27□□□□□ -0.29
CHGA-201ENST00000216492 ANKRD39Q53RE8 183 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 CSPG4Q6UVK1 2322 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 BPIFA4PQ86YQ2 179 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 C5orf56Q8N8D9 126 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 OR4F17Q8NGA8 305 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 C18orf32Q8TCD1 76 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 SHANK2-AS3Q9BTD1 123 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 GFRA4Q9GZZ7 299 aa13.27□□□□□ -0.29
CHGA-201ENST00000216492 A0A1B0GXF2 115 aa13.26□□□□□ -0.29
CHGA-201ENST00000216492 C19orf71A6NCJ1 209 aa13.26□□□□□ -0.29
CHGA-201ENST00000216492 DIRC3C9JPN6 131 aa13.26□□□□□ -0.29
CHGA-201ENST00000216492 H3BUX3 64 aa13.26□□□□□ -0.29
CHGA-201ENST00000216492 CAMPP49913 170 aa13.26□□□□□ -0.29
CHGA-201ENST00000216492 Q86TA4 180 aa13.26□□□□□ -0.29
CHGA-201ENST00000216492 CIARTQ8N365 385 aaPredicted RBP13.26□□□□□ -0.29
CHGA-201ENST00000216492 MOB4Q9Y3A3 225 aa13.26□□□□□ -0.29
CHGA-201ENST00000216492 TRAV30A0A087WSZ9 112 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 M0R143 59 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 GDF5OSQ5U4N7 250 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 OR4B1Q8NGF8 309 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 BORCS7Q96B45 105 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 FASNP49327 2511 aaKnown RBP13.25□□□□□ -0.29
CHGA-201ENST00000216492 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 NPIPB5A8MRT5 1133 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 LY6EQ16553 131 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 MRPL52Q86TS9 123 aaKnown RBP13.25□□□□□ -0.29
CHGA-201ENST00000216492 BCL6BQ8N143 479 aaPredicted RBP13.25□□□□□ -0.29
CHGA-201ENST00000216492 FOXC2Q99958 501 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 MIEN1Q9BRT3 115 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 PAM16Q9Y3D7 125 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 CREBBPQ92793 2442 aa13.25□□□□□ -0.29
CHGA-201ENST00000216492 CCDC168Q8NDH2 2452 aa13.24□□□□□ -0.29
CHGA-201ENST00000216492 FAM231BA6NCW3 169 aa13.24□□□□□ -0.29
CHGA-201ENST00000216492 SH2D7A6NKC9 451 aaPredicted RBP13.24□□□□□ -0.29
CHGA-201ENST00000216492 H3BRN7 92 aa13.24□□□□□ -0.29
CHGA-201ENST00000216492 K7EQM0 130 aa13.24□□□□□ -0.29
CHGA-201ENST00000216492 FAM162BQ5T6X4 162 aa13.24□□□□□ -0.29
CHGA-201ENST00000216492 TCF24Q7RTU0 167 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms