RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tmprss5Q9ER04 455 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Egr4Q9WUF2 478 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gli3Q61602 1583 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Arid1bE9Q4N7 2244 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ighv14-3A0A075B5R9 117 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tmem139E9PX92 214 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm21719J3KMI9 230 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Q6DIA7 600 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Sox21Q811W0 276 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Neurl3Q8CJC5 254 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cox6cQ9CPQ1 76 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Trav6n-7A0A075B6A6 116 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Id4P41139 161 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 CxadrP97792 365 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Myct1Q8R411 188 aa10.37□□□□□ -0.75
Trim56-201ENSMUST00000054384 Duxbl2Q7TNE6 350 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Klri1B2KG20 248 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tff1Q08423 87 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr1178Q7TR20 323 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Spink2Q8BMY7 86 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm45736A0A1B0GS18 427 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tnfsf12O54907 249 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Rpl8P62918 257 aaKnown RBP10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm20816Q5FWD4 227 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dleu7Q8CHZ8 209 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 RetnQ99P87 114 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ndufaf3Q9JKL4 185 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr1264Q9R0K2 308 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dock7Q8R1A4 2130 aaKnown RBP10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Alpk2Q91ZB0 2144 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Adcyap1O70176 175 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Vax1Q2NKI2 338 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Prdx2Q61171 198 aaKnown RBP10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr965Q7TRA7 312 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr279Q8VFD8 310 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 ClpsQ9CQC2 113 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Rnf39A2RT81 352 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 HhexP43120 271 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 AfmidQ8K4H1 305 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Leprotl1Q9CQ74 131 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 PigpQ9JHG1 132 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Pkd1l3Q2EG98 2201 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr1328B1ARV2 313 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Defa-rs7P50715 91 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 OacylQ8BML2 685 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Slc25a10Q9QZD8 287 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm21310J3QQ23 232 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Zdhhc23Q5Y5T3 425 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 Znf641Q8BZ34 422 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 9230112D13RikQ9D260 137 aa10.36□□□□□ -0.75
Trim56-201ENSMUST00000054384 SergefQ80YD6 464 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Avpi1Q9D7H4 142 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr961Q9EQ84 314 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Rnase2bO35292 155 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 TymsP07607 307 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ucp3P56501 308 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 BC049730Q810N3 246 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Mettl27Q8BGM4 238 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr470Q8VF65 314 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm28845A0A087WR76 214 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 BC053393A0A0B4J1F6 192 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ceacam1P31809 521 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 C1ql3Q9ESN4 255 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ralgapa2A3KGS3 1872 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm38303A0A0A6YWW8 100 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Saa1P05366 122 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dhrs11Q3U0B3 260 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dll1Q61483 722 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Arid2E9Q7E2 1828 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Igkv14-100A0A0G2JG36 117 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 InmtP40936 264 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Defb21Q8C5Z4 100 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Cacng8Q8VHW2 423 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 LfngO09010 378 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 P01665 111 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 P01666 111 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm13199Q8C8E0 125 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 D1Ertd622eQ8VEB3 207 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 9130008F23RikQ9D2Z6 181 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm10097J3KMK7 105 aa10.35□□□□□ -0.75
Trim56-201ENSMUST00000054384 Spink14B9EJP9 96 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm21732J3QM79 361 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm21921J3QNB5 361 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Vdac1Q60932 296 aaKnown RBP10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Klk8Q61955 260 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Prr30Q9D9B7 401 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ank3G5E8K5 1961 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm20696H3BJN7 74 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Dll3O88516 592 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Nxph1Q61200 271 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Atp5lQ9CPQ8 103 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Vmn1r232A2RTT5 351 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr553Q7TRS6 326 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Mrps18cQ8R2L5 143 aaKnown RBP10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Lilra6A0A0B4J1F3 663 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Klk1b26P36369 261 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Lhfpl4Q5U4E0 247 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 BadQ61337 204 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 LiphQ8CIV3 451 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Eif3gQ9Z1D1 320 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 112 ms