RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PSG1P11464 419 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 ASCL2Q99929 193 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 ZNF785A8K8V0 405 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 LYNX1G3V0Z9 82 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 PRRG2O14669 202 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 LYNX1P0DP58 116 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 SMIM12Q96EX1 92 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 FMC1Q96HJ9 113 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 DCHS2Q6V1P9 2916 aa11□□□□□ -0.65
PHGDH-233ENST00000642021 IGHV2-26A0A0B4J1V2 119 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 LYZP61626 148 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 ASCL5Q7RTU5 278 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 LRBAP50851 2863 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 SHISA9B4DS77 424 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 IGLV1-47P01700 117 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 IGLV2-11P01706 119 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 APOBEC3AP31941 199 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-233ENST00000642021 ZNF138P52744 262 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 PLP1P60201 277 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 PRSS57Q6UWY2 283 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 PPP1R27Q86WC6 154 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 DYNLRB1Q9NP97 96 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 INSIG2Q9Y5U4 225 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 F11RQ9Y624 299 aaKnown RBP10.99□□□□□ -0.65
PHGDH-233ENST00000642021 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 J3KRW8 73 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 OVOL3O00110 214 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 IGLC1P0CG04 106 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 OR4F17Q8NGA8 305 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 JKAMPQ9P055 326 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 SVEP1Q4LDE5 3571 aa10.99□□□□□ -0.65
PHGDH-233ENST00000642021 IGHV1-24A0A0C4DH33 117 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 ODF1Q14990 250 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 ABHD17AQ96GS6 310 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 C17orf77Q96MU5 243 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 ZNF492Q9P255 531 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 CT83Q5H943 113 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 UNQ5815/PRO19632Q6UWF5 114 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 GOLT1AQ6ZVE7 132 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 DAZAP1Q96EP5 407 aaKnown RBP10.98□□□□□ -0.65
PHGDH-233ENST00000642021 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
PHGDH-233ENST00000642021 SLC25A39Q9BZJ4 359 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-233ENST00000642021 MRPS16Q9Y3D3 137 aaKnown RBP10.98□□□□□ -0.65
PHGDH-233ENST00000642021 LOC105371242A0A075B767 164 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 IGHV1-69-2A0A0G2JMI3 117 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 RBPMS2Q6ZRY4 209 aaKnown RBP10.97□□□□□ -0.65
PHGDH-233ENST00000642021 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 Q86TA4 180 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 MCRIP2Q9BUT9 160 aaKnown RBP10.97□□□□□ -0.65
PHGDH-233ENST00000642021 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 BUB1B-PAK6H3BSN5 160 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 APOHP02749 345 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-233ENST00000642021 COX7A1P24310 79 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 COL8A1P27658 744 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 Q8NA96 180 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 IGFBPL1Q8WX77 278 aa10.97□□□□□ -0.65
PHGDH-233ENST00000642021 I3L2K1 104 aa10.96□□□□□ -0.65
PHGDH-233ENST00000642021 IGKV1-17P01599 117 aa10.96□□□□□ -0.65
PHGDH-233ENST00000642021 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.65
PHGDH-233ENST00000642021 OR4C46A6NHA9 309 aa10.96□□□□□ -0.66
PHGDH-233ENST00000642021 RBP4P02753 201 aa10.96□□□□□ -0.66
PHGDH-233ENST00000642021 LDLRAD2Q5SZI1 272 aa10.96□□□□□ -0.66
PHGDH-233ENST00000642021 RALYQ9UKM9 306 aaKnown RBP10.96□□□□□ -0.66
PHGDH-233ENST00000642021 LOC102724200A0A096LPH7 203 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-233ENST00000642021 CRXO43186 299 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-233ENST00000642021 GFRALQ6UXV0 394 aa10.95□□□□□ -0.66
PHGDH-233ENST00000642021 GFRA4Q9GZZ7 299 aa10.95□□□□□ -0.66
PHGDH-233ENST00000642021 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
PHGDH-233ENST00000642021 hDV102S1A0JD36 115 aa10.95□□□□□ -0.66
PHGDH-233ENST00000642021 SYS1-DBNDD2H3BUS1 97 aa10.95□□□□□ -0.66
PHGDH-233ENST00000642021 PRR30Q53SZ7 412 aaPredicted RBP10.95□□□□□ -0.66
PHGDH-233ENST00000642021 ZNF318Q5VUA4 2279 aa10.95□□□□□ -0.66
PHGDH-233ENST00000642021 LEPROTL1O95214 131 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 PAX2Q02962 417 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 SOX21Q9Y651 276 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-233ENST00000642021 CHEK1O14757 476 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-233ENST00000642021 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
PHGDH-233ENST00000642021 ZC2HC1AQ96GY0 325 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 RASL11BQ9BPW5 248 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 NDFIP1Q9BT67 221 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 SCGB2A2Q13296 93 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 UBE2V1Q13404 147 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 BCL6BQ8N143 479 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-233ENST00000642021 MUC15Q8N387 334 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 TMEM14CQ9P0S9 112 aa10.94□□□□□ -0.66
PHGDH-233ENST00000642021 CSN3P07498 182 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 RBPJQ06330 500 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 S4R3C0 116 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 FAM231BA6NCW3 169 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 K7EIM0 57 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 HAX1O00165 279 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 ARMS2P0C7Q2 107 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 CRIP1P50238 77 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 RPEQ96AT9 228 aa10.93□□□□□ -0.66
PHGDH-233ENST00000642021 TRBV19A0A075B6N1 114 aa10.92□□□□□ -0.66
PHGDH-233ENST00000642021 PLGLAQ15195 96 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms