RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 USMG5Q96IX5 58 aa16.1■□□□□ 0.17
CACNA1A-257ENST00000638009 GAGE7O76087 117 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 GAGE12FP0CL80 117 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 GAGE12GP0CL81 117 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 GAGE12IP0CL82 117 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 SLAQ13239 276 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 ZPLD1Q8TCW7 415 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 CSTL1Q9H114 145 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 SMAD7O15105 426 aaKnown RBP16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 AMBPP02760 352 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 TRGV9Q99603 122 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 CCL4P13236 92 aa16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 SRSF7Q16629 238 aaKnown RBP eCLIP16.09■□□□□ 0.17
CACNA1A-257ENST00000638009 OR11H6Q8NGC7 330 aa16.08■□□□□ 0.17
CACNA1A-257ENST00000638009 TRPT1Q86TN4 253 aaKnown RBP16.08■□□□□ 0.17
CACNA1A-257ENST00000638009 SRRM4A7MD48 611 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-257ENST00000638009 C18orf12Q96KH6 178 aa16.08■□□□□ 0.16
CACNA1A-257ENST00000638009 LSM4Q9Y4Z0 139 aaKnown RBP16.08■□□□□ 0.16
CACNA1A-257ENST00000638009 WNT2P09544 360 aa16.08■□□□□ 0.16
CACNA1A-257ENST00000638009 F8P00451 2351 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 C9orf118A6NHY6 69 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 IGHG2P01859 326 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 IGHV1-24A0A0C4DH33 117 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 GNG5P63218 68 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 OCC1Q8TAD7 63 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 TMEM133Q9H2Q1 129 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 KIAA1671Q9BY89 1806 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 F8VVB4 439 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 F8VWA3 439 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 BSPH1Q075Z2 132 aa16.07■□□□□ 0.16
CACNA1A-257ENST00000638009 SAA2-SAA4A0A096LPE2 208 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 K7ERS5 55 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 SAA2P0DJI9 122 aaPredicted RBP16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 DSCR9P59020 149 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 PCOLCEQ15113 449 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 ZNF497Q6ZNH5 498 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 C9orf139Q6ZV77 190 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 TRAV25A0A0B4J276 109 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 A6NNC1 897 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 LINC00271P0C7V0 271 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 BVES-AS1Q5T3Y7 98 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 J3KT08 172 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 TMEM92Q6UXU6 159 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 C12orf77C9JDV5 145 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 NUP210LQ5VU65 1888 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 BAALCQ8WXS3 180 aa16.06■□□□□ 0.16
CACNA1A-257ENST00000638009 CRLF1O75462 422 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 LIME1Q9H400 295 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 CELA2BP08218 269 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 MYO9AB2RTY4 2548 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 SHISA9B4DS77 424 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 GATA2P23769 480 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 RFLNBQ8N5W9 214 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 MPZP25189 248 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 C17orf98A8MV24 154 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 ZNF501Q96CX3 271 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 SPXQ9BT56 116 aa16.05■□□□□ 0.16
CACNA1A-257ENST00000638009 TRBV25-1A0A075B6N4 114 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 MPV17L2Q567V2 206 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 ZNF106Q9H2Y7 1883 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 F6UB75 175 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 ATOX1O00244 68 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 A0A1W2PRX2 142 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 C1QTNF5Q9BXJ0 243 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 SRSF8Q9BRL6 282 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 NUP35Q8NFH5 326 aa16.04■□□□□ 0.16
CACNA1A-257ENST00000638009 PRR19A6NJB7 356 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 IGKV1D-16P01601 117 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 MBNL3Q9NUK0 354 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 RFNGQ9Y644 331 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 PRO1854Q9UHT4 67 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 ACACBO00763 2458 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 LINC01565O15544 149 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 GAGE12HA6NDE8 117 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 LHBP01229 141 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 METRNQ9UJH8 293 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 C15orf32Q32M92 178 aa16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 RTBDNQ9BSG5 229 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-257ENST00000638009 FAM223BA6NKX1 122 aa16.02■□□□□ 0.16
CACNA1A-257ENST00000638009 FNDC10F2Z333 226 aa16.02■□□□□ 0.16
CACNA1A-257ENST00000638009 FAM223AQ8IWN6 122 aa16.02■□□□□ 0.16
CACNA1A-257ENST00000638009 KNCNA6PVL3 124 aa16.02■□□□□ 0.16
CACNA1A-257ENST00000638009 MRPL14Q6P1L8 145 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-257ENST00000638009 TMEM158Q8WZ71 300 aa16.02■□□□□ 0.16
CACNA1A-257ENST00000638009 ZC2HC1BQ5TFG8 222 aa16.02■□□□□ 0.15
CACNA1A-257ENST00000638009 TRBV6-7A0A0A0MS04 114 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 RAMP3O60896 148 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 TBX6O95947 436 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 SUPT4H1P63272 117 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 MORN2Q502X0 79 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 RNF114Q9Y508 228 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 C2CD3Q4AC94 2353 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 FGF6P10767 208 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 OOSP1A8MZH6 123 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 NDUFB1O75438 58 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 ZFYVE26Q68DK2 2539 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 A0A0G2JK05 382 aa16.01■□□□□ 0.15
CACNA1A-257ENST00000638009 TEX48A0A1B0GUV7 120 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms