RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TRGV9Q99603 122 aa9.63□□□□□ -0.87
SHPRH-211ENST00000629427 A0A1B0GWJ7 208 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 H0YJW9 148 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 PSPNO60542 156 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 IGKV1D-8A0A087WSZ0 117 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 TCRAP04437 139 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 ATXN8Q156A1 80 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 SIP14410 1827 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 CRYGSP22914 178 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 SS18Q15532 418 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 LYPD2Q6UXB3 125 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 Q96MF0 132 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 IGKV1-12A0A0C4DH73 117 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 IGKV1D-12P01611 117 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 C1orf159Q96HA4 380 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 MEGF9Q9H1U4 602 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 SLC25A16P16260 332 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 SYNJ2BPP57105 145 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 VSIRQ9H7M9 311 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 TRAV3A0A0B4J244 114 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 F8WEM9 126 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 CEACAM8P31997 349 aaPredicted RBP9.62□□□□□ -0.87
SHPRH-211ENST00000629427 SRSF3P84103 164 aaKnown RBP9.62□□□□□ -0.87
SHPRH-211ENST00000629427 IGFL4Q6B9Z1 124 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 Q8TAT8 98 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 MS4A6AQ9H2W1 248 aa9.62□□□□□ -0.87
SHPRH-211ENST00000629427 ADAMTS9Q9P2N4 1935 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 LYZL1Q6UWQ5 148 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 CSTL1Q9H114 145 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 WFDC1Q9HC57 220 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 SH2D1AO60880 128 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 HIST1H4AP62805 103 aaKnown RBP9.61□□□□□ -0.87
SHPRH-211ENST00000629427 SPATA31B1PQ5VZV4 182 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 SIGLEC9Q9Y336 463 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 CFHR3Q02985 330 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 TMEM155Q4W5P6 130 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 RUSC1-AS1Q66K80 236 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 NABP1Q96AH0 204 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 GAFA1Q96PS6 74 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
SHPRH-211ENST00000629427 IGKV1-27A0A075B6S5 117 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 VCYO14598 125 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 RASL10AQ92737 203 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 TRAV13-1A0A0B4J241 112 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 ITGB1BP1O14713 200 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 PRR31Q5SQ13 230 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 TNFSF13O75888 250 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 A0A087WWL8 130 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 ID3Q02535 119 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 Q5PR19 223 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 LINC01549A6NIU2 74 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 A8MXK9 166 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 NR2C2APQ86WQ0 139 aa9.6□□□□□ -0.87
SHPRH-211ENST00000629427 DMRTC2Q8IXT2 367 aaPredicted RBP9.6□□□□□ -0.87
SHPRH-211ENST00000629427 C14orf178Q8N769 122 aaPredicted RBP9.6□□□□□ -0.87
SHPRH-211ENST00000629427 PLXNA4Q9HCM2 1894 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 TRAV9-2A0A087WT02 112 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 EFNA2O43921 213 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 SRSF4Q08170 494 aaKnown RBP9.59□□□□□ -0.87
SHPRH-211ENST00000629427 MDS2Q8NDY4 140 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 E7EQL1 145 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 LYPD3O95274 346 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 PSG3Q16557 428 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 C9orf139Q6ZV77 190 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 RNF5Q99942 180 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 LTBP1Q14766 1721 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 F5H768 121 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 LGALS1P09382 135 aaKnown RBP9.59□□□□□ -0.87
SHPRH-211ENST00000629427 GATA4P43694 442 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 PLCE1Q9P212 2302 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 A8MWV9 139 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 LEPROTO15243 131 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 MSMBP08118 114 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 ORAOV1Q8WV07 137 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 MSRB2Q9Y3D2 182 aa9.59□□□□□ -0.87
SHPRH-211ENST00000629427 J3QRE1 110 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 CGB3P0DN86 165 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 RPL32P62910 135 aaKnown RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 FBLN5Q9UBX5 448 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 PCP4P48539 62 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 DEFB131AP59861 70 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 MBD3L4A6NDZ8 208 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 MBD3L3A6NE82 208 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 MBD3L5A6NJ08 208 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 F8VVB4 439 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 F8VWA3 439 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 MBD3L2Q8NHZ7 208 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 FAM110DQ8TAY7 271 aaPredicted RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 PLEKHB2Q96CS7 222 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 GSN-AS1Q9NRJ2 163 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 RIF1Q5UIP0 2472 aaKnown RBP9.58□□□□□ -0.88
SHPRH-211ENST00000629427 ATRAIDQ6UW56 229 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 BTCP35070 178 aa9.58□□□□□ -0.88
SHPRH-211ENST00000629427 LINC00205P59089 165 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms