RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SRRM4A7MD48 611 aaKnown RBP8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 DIRC3C9JPN6 131 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 LEPROTL1O95214 131 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 IGHV4-59P01825 116 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 GZMBP10144 247 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM95Q3KNT9 176 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM97Q5BJF2 176 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 C12orf54Q6X4T0 127 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 Q8TCH9 128 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 EPDR1Q9UM22 224 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 TNFRSF18Q9Y5U5 241 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 FRYLO94915 3013 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 ARHGAP32A7KAX9 2087 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 HIGD1CA8MV81 97 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 NDUFB8O95169 186 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 FER1L6-AS1Q8NA97 138 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 MGST2Q99735 147 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 HSPB8Q9UJY1 196 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 HOXA3O43365 443 aaPredicted RBP8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 RNASE2P10153 161 aaKnown RBP8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 GFI1BQ5VTD9 330 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 ZNF562Q6V9R5 426 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 SLC50A1Q9BRV3 221 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 H7C2G1 150 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 IGHV3-53P01767 116 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 HBBP68871 147 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 FGF23Q9GZV9 251 aaPredicted RBP8.18□□□□□ -1.1
SMARCA1-205ENST00000617310 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 ATRAIDQ6UW56 229 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 ATG101Q9BSB4 218 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 TDGF1P3P51864 188 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 DEFB112Q30KQ8 113 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 RNF138Q8WVD3 245 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 PRUNE2Q8WUY3 3088 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 H3BVH4 76 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 PSMB2P49721 201 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 FAM120AOSQ5T036 256 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 BEND2Q8NDZ0 799 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 OTORQ9NRC9 128 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 LOC400499M0QZD8 3231 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 IFITM10A6NMD0 228 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 MSMPQ1L6U9 139 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 CIARTQ8N365 385 aaPredicted RBP8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 RNF5Q99942 180 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
SMARCA1-205ENST00000617310 ATG2AQ2TAZ0 1938 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 TRAV12-3A0A0B4J271 114 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 IGKV3D-20A0A0C4DH25 116 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 GATA3P23771 443 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 DEFB131AP59861 70 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM249Q2WGJ8 235 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 OCC1Q8TAD7 63 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 RPP21Q9H633 154 aaKnown RBP8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 PEF1Q9UBV8 284 aaKnown RBP8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 C7orf71A4D174 169 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 DEFB113Q30KQ7 82 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 TCF23Q7RTU1 214 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 C11orf53Q8IXP5 236 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 GEMIN7Q9H840 131 aaKnown RBP8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 TRGV4A0A0C4DH28 118 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 GCSHP23434 173 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 RPL23P62829 140 aaKnown RBP8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
SMARCA1-205ENST00000617310 IGHV2-5P01817 119 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 IGHV4-38-2P0DP08 117 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 TEX36Q5VZQ5 186 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 C22orf34Q6ZV56 151 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 A0A1W2PRE2 83 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM50AO95807 157 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 LINC00479Q96M42 142 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 AGMATQ9BSE5 352 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 ALPK3Q96L96 1907 aa8.15□□□□□ -1.1
SMARCA1-205ENST00000617310 FRYQ5TBA9 3013 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 C19orf84I3L1E1 186 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 MAST4O15021 2626 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 ATRQ13535 2644 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 FAM90A9PA6NNJ1 464 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 C15orf65H3BRN8 121 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 RNF151Q2KHN1 245 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 TMEM170BQ5T4T1 132 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 SPSB3Q6PJ21 355 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 FAM19A2Q8N3H0 131 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 RNF114Q9Y508 228 aa8.15□□□□□ -1.11
SMARCA1-205ENST00000617310 CENPEQ02224 2701 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 OR11H12B2RN74 326 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 SNCGO76070 127 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 DUSP14O95147 198 aaKnown RBP8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 IGKV1-39P01597 117 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 IGKV1D-39P04432 117 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 STAG3L2P0CL84 134 aa8.14□□□□□ -1.11
SMARCA1-205ENST00000617310 STAG3L3P0CL85 134 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms