RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 A0A0G2JLM5 398 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGLC7A0M8Q6 106 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGHV2-5P01817 119 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 ADORA2A-AS1P86434 159 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 ASCL2Q99929 193 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 TMEM208Q9BTX3 173 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 CHD8Q9HCK8 2581 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 TRAV41A0A0B4J266 112 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 SRSF8Q9BRL6 282 aaKnown RBP10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGKV2-40A0A087WW87 121 aaPredicted RBP10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGKV2D-40P01614 121 aaPredicted RBP10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 CD33P20138 364 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGFL4Q6B9Z1 124 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 MOB4Q9Y3A3 225 aa10.55□□□□□ -0.72
PPP4R3B-206ENST00000616407 NPIPB5A8MRT5 1133 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 A0A1B0GUS0 222 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 REC114Q7Z4M0 266 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 H3BUX3 64 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 NDUFB8O95169 186 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 UBE2E1P51965 193 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 TMEM249Q2WGJ8 235 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 IFITM10A6NMD0 228 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 A6NNC1 897 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 E7EUB6 86 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 M0QZK8 103 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 TOMM40O96008 361 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 PTTG1IPP53801 180 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 EBLN2Q6P2I7 272 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 FER1L6-AS1Q8NA97 138 aa10.54□□□□□ -0.72
PPP4R3B-206ENST00000616407 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 APOHP02749 345 aaPredicted RBP10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 BTF3P20290 206 aaKnown RBP10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 ZNF324O75467 553 aaPredicted RBP10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 ASPHD1Q5U4P2 390 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 Q6AWC8 147 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 DYNLRB2Q8TF09 96 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 TMEM70Q9BUB7 260 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 TCAPO15273 167 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 PAX8Q06710 450 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 EIF4EBP1Q13541 118 aaPredicted RBP10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 C11orf52Q96A22 123 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 UQCR10Q9UDW1 63 aa10.53□□□□□ -0.72
PPP4R3B-206ENST00000616407 IGLC1P0CG04 106 aa10.52□□□□□ -0.72
PPP4R3B-206ENST00000616407 PPIFP30405 207 aaKnown RBP10.52□□□□□ -0.72
PPP4R3B-206ENST00000616407 MYOZ3Q8TDC0 251 aa10.52□□□□□ -0.72
PPP4R3B-206ENST00000616407 SELENOKQ9Y6D0 94 aa10.52□□□□□ -0.72
PPP4R3B-206ENST00000616407 CHD3Q12873 2000 aaKnown RBP10.52□□□□□ -0.72
PPP4R3B-206ENST00000616407 KIAA1549Q9HCM3 1950 aa10.52□□□□□ -0.72
PPP4R3B-206ENST00000616407 SLC50A1Q9BRV3 221 aa10.52□□□□□ -0.73
PPP4R3B-206ENST00000616407 IGKV1OR2-108A0A075B7D4 117 aa10.52□□□□□ -0.73
PPP4R3B-206ENST00000616407 THAP8Q8NA92 274 aa10.52□□□□□ -0.73
PPP4R3B-206ENST00000616407 IGHV2-70DA0A0C4DH43 119 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 G3V318 75 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 Q8TAT8 98 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 GOLT1BQ9Y3E0 138 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 ATP6V0E1O15342 81 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 ZNF25P17030 456 aaPredicted RBP10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 TRBV20OR9-2A0A075B6H5 130 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 M0R381 172 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 TYMSP04818 313 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 NDPQ00604 133 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 MORN5Q5VZ52 161 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 ATP5L2Q7Z4Y8 100 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 V9GYV3 84 aa10.51□□□□□ -0.73
PPP4R3B-206ENST00000616407 HINT1P49773 126 aaPredicted RBP10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 C14orf144Q96I85 54 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 FBLL1A6NHQ2 334 aaKnown RBP10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 B4DSR2 109 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 IGLV1-47P01700 117 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 RPLP1P05386 114 aaKnown RBP10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 GLMPQ8WWB7 406 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 JKAMPQ9P055 326 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 K7EN84 100 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 ZNF841Q6ZN19 808 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 NIT1Q86X76 327 aa10.5□□□□□ -0.73
PPP4R3B-206ENST00000616407 ORMDL3Q8N138 153 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 A0A1B0GW15 77 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 NMUP48645 174 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 CTAG1AP78358 180 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 PSG3Q16557 428 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 Q86TA4 180 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 DMRTC2Q8IXT2 367 aaPredicted RBP10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 LYPD1Q8N2G4 141 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 LINC00614P0C842 121 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 A0A1B0GV90 55 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 C18orf15Q96N68 181 aa10.49□□□□□ -0.73
PPP4R3B-206ENST00000616407 SRD5A1P18405 259 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms