RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 LINC00205P59089 165 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BCP62807 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST2H2BEQ16778 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BHQ93079 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BNQ99877 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 HIST1H2BMQ99879 126 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 CACNA1BQ00975 2339 aa12.75□□□□□ -0.37
TNXB-208ENST00000611016 TCRAP04437 139 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 Q96MF0 132 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 A6NNC1 897 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 ZNF815PA8K554 130 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 FCN3O75636 299 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 IGKV1-5P01602 117 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 PLA2G2CQ5R387 149 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 TOMM40O96008 361 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
TNXB-208ENST00000611016 ATXN8Q156A1 80 aa12.74□□□□□ -0.37
TNXB-208ENST00000611016 MRPL52Q86TS9 123 aaKnown RBP12.74□□□□□ -0.37
TNXB-208ENST00000611016 H3BUT2 72 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 RNF114Q9Y508 228 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 ASCL4Q6XD76 172 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 DPH3P1Q9H4G8 78 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 RIF1Q5UIP0 2472 aaKnown RBP12.73□□□□□ -0.37
TNXB-208ENST00000611016 TRAV12-3A0A0B4J271 114 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 GATA3P23771 443 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
TNXB-208ENST00000611016 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
TNXB-208ENST00000611016 MGST2Q99735 147 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 C11orf68Q9H3H3 251 aaKnown RBP12.73□□□□□ -0.37
TNXB-208ENST00000611016 CYTL1Q9NRR1 136 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 GZMBP10144 247 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 PRTN3P24158 256 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
TNXB-208ENST00000611016 REG4Q9BYZ8 158 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 POLEQ07864 2286 aa12.73□□□□□ -0.37
TNXB-208ENST00000611016 TRGV1A0A0A0MS02 117 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 J3QKU1 62 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 CFPP27918 469 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 RASL10AQ92737 203 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 NCOR1P1Q9H4R4 102 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 NHP2Q9NX24 153 aaKnown RBP12.72□□□□□ -0.37
TNXB-208ENST00000611016 RFNGQ9Y644 331 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
TNXB-208ENST00000611016 LYL1P12980 280 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 TICRRQ7Z2Z1 1910 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
TNXB-208ENST00000611016 PDE6HQ13956 83 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 UBE2E2Q96LR5 201 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 VCYO14598 125 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 IGHV3-53P01767 116 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 IGFL3Q6UXB1 125 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 GFRA4Q9GZZ7 299 aa12.72□□□□□ -0.37
TNXB-208ENST00000611016 MGAMO43451 1857 aa12.71□□□□□ -0.37
TNXB-208ENST00000611016 GGTLC3B5MD39 225 aa12.71□□□□□ -0.37
TNXB-208ENST00000611016 MRPL27Q9P0M9 148 aaKnown RBP12.71□□□□□ -0.37
TNXB-208ENST00000611016 A0A087WX48 190 aa12.71□□□□□ -0.37
TNXB-208ENST00000611016 PSG3Q16557 428 aa12.71□□□□□ -0.37
TNXB-208ENST00000611016 TRAV8-2A0A0B4J237 113 aa12.71□□□□□ -0.38
TNXB-208ENST00000611016 TNFSF13O75888 250 aa12.71□□□□□ -0.38
TNXB-208ENST00000611016 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.38
TNXB-208ENST00000611016 COLCA2A8K830 154 aa12.71□□□□□ -0.38
TNXB-208ENST00000611016 AMBPP02760 352 aa12.71□□□□□ -0.38
TNXB-208ENST00000611016 SIP14410 1827 aa12.71□□□□□ -0.38
TNXB-208ENST00000611016 A8MWV9 139 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 DERL1Q9BUN8 251 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 M0R2P5 195 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 INSP01308 110 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 PI4KAP42356 2102 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 QRFPP83859 136 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 PRSS33Q8NF86 280 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 SYNJ2BPP57105 145 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 ERG28Q9UKR5 140 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 TRAV2A0A0B4J234 112 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 TRAV8-4A0A0B4J246 113 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 DEFB104AQ8WTQ1 72 aa12.7□□□□□ -0.38
TNXB-208ENST00000611016 PLXNA3P51805 1871 aa12.69□□□□□ -0.38
TNXB-208ENST00000611016 Q71RC1 249 aaPredicted RBP12.69□□□□□ -0.38
TNXB-208ENST00000611016 ZNRD1Q9P1U0 126 aa12.69□□□□□ -0.38
TNXB-208ENST00000611016 RLFQ13129 1914 aa12.69□□□□□ -0.38
TNXB-208ENST00000611016 TEX43Q6ZNM6 134 aa12.69□□□□□ -0.38
TNXB-208ENST00000611016 HIST1H2BLQ99880 126 aa12.69□□□□□ -0.38
TNXB-208ENST00000611016 CKS1BP61024 79 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 OVOL3O00110 214 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 HIST3H2BBQ8N257 126 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 NBL1P41271 181 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 UBE2E1P51965 193 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 ZNF124Q15973 351 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 LCN12Q6JVE5 192 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 Q8TAT8 98 aa12.68□□□□□ -0.38
TNXB-208ENST00000611016 HEATR1Q9H583 2144 aaKnown RBP12.68□□□□□ -0.38
TNXB-208ENST00000611016 S100A7L2Q5SY68 101 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms