RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TEX38Q6PEX7 206 aa13.53□□□□□ -0.24
PPFIA3-207ENST00000602716 TRAPPC1Q9Y5R8 145 aa13.53□□□□□ -0.24
PPFIA3-207ENST00000602716 IGHV3-23P01764 117 aa13.52□□□□□ -0.24
PPFIA3-207ENST00000602716 LINC00869P0C866 280 aa13.52□□□□□ -0.24
PPFIA3-207ENST00000602716 GATA2P23769 480 aaPredicted RBP13.52□□□□□ -0.24
PPFIA3-207ENST00000602716 C10orf99Q6UWK7 81 aa13.52□□□□□ -0.24
PPFIA3-207ENST00000602716 CACNG8Q8WXS5 425 aa13.52□□□□□ -0.24
PPFIA3-207ENST00000602716 MS4A10Q96PG2 267 aa13.52□□□□□ -0.24
PPFIA3-207ENST00000602716 CORTO00230 105 aa13.52□□□□□ -0.25
PPFIA3-207ENST00000602716 OR10J1P30954 320 aa13.52□□□□□ -0.25
PPFIA3-207ENST00000602716 REC114Q7Z4M0 266 aa13.52□□□□□ -0.25
PPFIA3-207ENST00000602716 GBGT1Q8N5D6 347 aa13.52□□□□□ -0.25
PPFIA3-207ENST00000602716 OR10G8Q8NGN5 311 aa13.52□□□□□ -0.25
PPFIA3-207ENST00000602716 TMEM18Q96B42 140 aa13.52□□□□□ -0.25
PPFIA3-207ENST00000602716 LCNL1Q6ZST4 164 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 ZNF355PQ9NSJ1 428 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 SLC45A2Q9UMX9 530 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 C9JCJ5 164 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 F8W735 103 aaPredicted RBP13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 K7EN84 100 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 PPIFP30405 207 aaKnown RBP13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 CFHR3Q02985 330 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 TMEM86BQ8N661 226 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 CDC42EP3Q9UKI2 254 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 LY96Q9Y6Y9 160 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 ARL2-SNX15V9GYD0 113 aa13.51□□□□□ -0.25
PPFIA3-207ENST00000602716 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
PPFIA3-207ENST00000602716 RHOGP84095 191 aa13.5□□□□□ -0.25
PPFIA3-207ENST00000602716 ZNF90Q03938 601 aa13.5□□□□□ -0.25
PPFIA3-207ENST00000602716 MIR17HGQ75NE6 70 aa13.5□□□□□ -0.25
PPFIA3-207ENST00000602716 UHRF2Q96PU4 802 aa13.5□□□□□ -0.25
PPFIA3-207ENST00000602716 FBXL7Q9UJT9 491 aa13.5□□□□□ -0.25
PPFIA3-207ENST00000602716 FN1P02751 2386 aaKnown RBP13.5□□□□□ -0.25
PPFIA3-207ENST00000602716 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 FAM181BA6NEQ2 426 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 ZNF329Q86UD4 541 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 THAP8Q8NA92 274 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 TMEM116Q8NCL8 245 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 NPFFR1Q9GZQ6 430 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 TRAV9-1A0A075B6T8 112 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 OR1L6Q8NGR2 347 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 NSD1Q96L73 2696 aaPredicted RBP13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 KLK15Q9H2R5 256 aa13.49□□□□□ -0.25
PPFIA3-207ENST00000602716 BTF3P20290 206 aaKnown RBP13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 KLK9Q2XQG4 91 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 C15orf32Q32M92 178 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 ETFRF1Q6IPR1 90 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 ZNF664Q8N3J9 261 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 TMEM68Q96MH6 324 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 PRSS22Q9GZN4 317 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 IL36BQ9NZH7 164 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 KLK9Q9UKQ9 250 aa13.48□□□□□ -0.25
PPFIA3-207ENST00000602716 IGLC1P0CG04 106 aa13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 SRSF2Q01130 221 aaKnown RBP13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 TMEM167BQ9NRX6 74 aa13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 ZNF705GA8MUZ8 300 aaPredicted RBP13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 A8MWP6 167 aa13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 ADMP35318 185 aa13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 TMEM256Q8N2U0 113 aa13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 CCDC140Q96MF4 163 aa13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 F8P00451 2351 aa13.47□□□□□ -0.25
PPFIA3-207ENST00000602716 A0A1B0GUS0 222 aa13.46□□□□□ -0.25
PPFIA3-207ENST00000602716 SLC17A3O00476 420 aa13.46□□□□□ -0.25
PPFIA3-207ENST00000602716 IGKV1-17P01599 117 aa13.46□□□□□ -0.25
PPFIA3-207ENST00000602716 TIGITQ495A1 244 aa13.46□□□□□ -0.25
PPFIA3-207ENST00000602716 ZNF503Q96F45 646 aa13.46□□□□□ -0.25
PPFIA3-207ENST00000602716 C21orf62Q9NYP8 219 aa13.46□□□□□ -0.25
PPFIA3-207ENST00000602716 TECRQ9NZ01 308 aaKnown RBP13.46□□□□□ -0.25
PPFIA3-207ENST00000602716 TCRBV4S1A1TA0A5B7 111 aa13.46□□□□□ -0.26
PPFIA3-207ENST00000602716 TRGV3P03979 118 aa13.46□□□□□ -0.26
PPFIA3-207ENST00000602716 HILS1P60008 231 aa13.46□□□□□ -0.26
PPFIA3-207ENST00000602716 SELENOTP62341 195 aa13.46□□□□□ -0.26
PPFIA3-207ENST00000602716 Q6ZSV7 163 aa13.46□□□□□ -0.26
PPFIA3-207ENST00000602716 Q8N2B8 174 aa13.46□□□□□ -0.26
PPFIA3-207ENST00000602716 SERTAD4Q9NUC0 356 aa13.46□□□□□ -0.26
PPFIA3-207ENST00000602716 IGLV1-40P01703 118 aa13.45□□□□□ -0.26
PPFIA3-207ENST00000602716 OR5G3P0C626 314 aa13.45□□□□□ -0.26
PPFIA3-207ENST00000602716 ZNF502Q8TBZ5 544 aa13.45□□□□□ -0.26
PPFIA3-207ENST00000602716 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
PPFIA3-207ENST00000602716 OR2T8A6NH00 312 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 NUPR1O60356 82 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 PF4V1P10720 104 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 CBLN1P23435 193 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 TPPP2P59282 170 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 IQCJQ1A5X6 159 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 Q56UQ5 140 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 C19orf24Q9BVV8 132 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 THYN1Q9P016 225 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 CENPWQ5EE01 88 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 ZNF418Q8TF45 676 aaPredicted RBP13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 TRGV9Q99603 122 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 CHRDL1Q9BU40 450 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 V9GYV3 84 aa13.44□□□□□ -0.26
PPFIA3-207ENST00000602716 HELTA6NFD8 242 aa13.43□□□□□ -0.26
PPFIA3-207ENST00000602716 RNASE1P07998 156 aaKnown RBP13.43□□□□□ -0.26
PPFIA3-207ENST00000602716 OR10J4P0C629 311 aa13.43□□□□□ -0.26
PPFIA3-207ENST00000602716 CRYBB3P26998 211 aa13.43□□□□□ -0.26
PPFIA3-207ENST00000602716 GPR183P32249 361 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms