RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 DNAH7Q8WXX0 4024 aa20.67■□□□□ 0.9
SSBP4-206ENST00000599699 H0YIZ8 118 aa20.66■□□□□ 0.9
SSBP4-206ENST00000599699 ISLRO14498 428 aa20.66■□□□□ 0.9
SSBP4-206ENST00000599699 SOCS3O14543 225 aa20.66■□□□□ 0.9
SSBP4-206ENST00000599699 COX7A2P2O60397 106 aa20.66■□□□□ 0.9
SSBP4-206ENST00000599699 SPP1P10451 314 aa20.66■□□□□ 0.9
SSBP4-206ENST00000599699 ATF4P18848 351 aaPredicted RBP20.66■□□□□ 0.9
SSBP4-206ENST00000599699 MORN3Q6PF18 240 aaPredicted RBP20.66■□□□□ 0.9
SSBP4-206ENST00000599699 PATE2Q6UY27 113 aa20.66■□□□□ 0.9
SSBP4-206ENST00000599699 RPL7P18124 248 aaKnown RBP20.65■□□□□ 0.9
SSBP4-206ENST00000599699 EWSR1Q01844 656 aaKnown RBP eCLIP20.65■□□□□ 0.9
SSBP4-206ENST00000599699 NHLH2Q02577 135 aa20.65■□□□□ 0.9
SSBP4-206ENST00000599699 FGL1Q08830 312 aa20.65■□□□□ 0.9
SSBP4-206ENST00000599699 CASC10Q5T4H9 136 aa20.65■□□□□ 0.9
SSBP4-206ENST00000599699 RNF24Q9Y225 148 aa20.65■□□□□ 0.9
SSBP4-206ENST00000599699 A0A0J9YWU9 116 aa20.64■□□□□ 0.89
SSBP4-206ENST00000599699 PET100P0DJ07 73 aa20.64■□□□□ 0.89
SSBP4-206ENST00000599699 FGF7P21781 194 aa20.64■□□□□ 0.89
SSBP4-206ENST00000599699 MIC13Q5XKP0 118 aa20.64■□□□□ 0.89
SSBP4-206ENST00000599699 Q6ZRG5 221 aa20.64■□□□□ 0.89
SSBP4-206ENST00000599699 IL17DQ8TAD2 202 aa20.64■□□□□ 0.89
SSBP4-206ENST00000599699 RARRES2Q99969 163 aa20.64■□□□□ 0.89
SSBP4-206ENST00000599699 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.63■□□□□ 0.89
SSBP4-206ENST00000599699 LINC00305Q7Z4B0 112 aa20.63■□□□□ 0.89
SSBP4-206ENST00000599699 OR5C1Q8NGR4 320 aa20.63■□□□□ 0.89
SSBP4-206ENST00000599699 AGRNO00468 2067 aa20.63■□□□□ 0.89
SSBP4-206ENST00000599699 ELOA3CA0A087WX78 387 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-206ENST00000599699 H3BMM0 161 aa20.62■□□□□ 0.89
SSBP4-206ENST00000599699 MPC2O95563 127 aa20.62■□□□□ 0.89
SSBP4-206ENST00000599699 DEFB1P60022 68 aa20.62■□□□□ 0.89
SSBP4-206ENST00000599699 TMEM41BQ5BJD5 291 aa20.62■□□□□ 0.89
SSBP4-206ENST00000599699 C10orf113Q5VZT2 155 aa20.62■□□□□ 0.89
SSBP4-206ENST00000599699 OR11H2Q8NH07 326 aa20.62■□□□□ 0.89
SSBP4-206ENST00000599699 HLA-DRB4P13762 266 aa20.61■□□□□ 0.89
SSBP4-206ENST00000599699 NUTF2P61970 127 aaKnown RBP20.61■□□□□ 0.89
SSBP4-206ENST00000599699 FOXI2Q6ZQN5 318 aa20.61■□□□□ 0.89
SSBP4-206ENST00000599699 RPRMQ9NS64 109 aa20.61■□□□□ 0.89
SSBP4-206ENST00000599699 HLA-DRB4X5D2U9 266 aa20.61■□□□□ 0.89
SSBP4-206ENST00000599699 IGKV3-20P01619 116 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 C4BPBP20851 252 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 CLINT1Q14677 625 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 GDF5OSQ5U4N7 250 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 TMEM37Q8WXS4 190 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 C17orf77Q96MU5 243 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 RNF126Q9BV68 326 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 MED28Q9H204 178 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 SAV1Q9H4B6 383 aaPredicted RBP20.6■□□□□ 0.89
SSBP4-206ENST00000599699 DNAJC4Q9NNZ3 241 aa20.6■□□□□ 0.89
SSBP4-206ENST00000599699 GIG44P09565 113 aaPredicted RBP20.59■□□□□ 0.89
SSBP4-206ENST00000599699 RPL29P47914 159 aaKnown RBP20.59■□□□□ 0.89
SSBP4-206ENST00000599699 B2MP61769 119 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 PRR20EP86478 221 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 PRR20CP86479 221 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 PRR20DP86480 221 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 PRR20BP86481 221 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 PRR20AP86496 221 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 EBLN2Q6P2I7 272 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 OR1L4Q8NGR5 311 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 THAP6Q8TBB0 222 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 LRRC20Q8TCA0 184 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 C20orf173Q96LM9 149 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 SLC39A9Q9NUM3 307 aa20.59■□□□□ 0.89
SSBP4-206ENST00000599699 MPDU1O75352 247 aa20.58■□□□□ 0.89
SSBP4-206ENST00000599699 OPCMLQ14982 345 aa20.58■□□□□ 0.89
SSBP4-206ENST00000599699 OR4B1Q8NGF8 309 aa20.58■□□□□ 0.89
SSBP4-206ENST00000599699 CLEC5AQ9NY25 188 aa20.58■□□□□ 0.89
SSBP4-206ENST00000599699 PXMP4Q9Y6I8 212 aa20.58■□□□□ 0.89
SSBP4-206ENST00000599699 CXCL3P19876 107 aa20.57■□□□□ 0.88
SSBP4-206ENST00000599699 IGFL4Q6B9Z1 124 aa20.57■□□□□ 0.88
SSBP4-206ENST00000599699 PFDN5Q99471 154 aa20.57■□□□□ 0.88
SSBP4-206ENST00000599699 MBD2Q9UBB5 411 aa20.57■□□□□ 0.88
SSBP4-206ENST00000599699 F6UB75 175 aa20.56■□□□□ 0.88
SSBP4-206ENST00000599699 RGS21Q2M5E4 152 aa20.56■□□□□ 0.88
SSBP4-206ENST00000599699 SPATA31B1PQ5VZV4 182 aa20.56■□□□□ 0.88
SSBP4-206ENST00000599699 BPIFA4PQ86YQ2 179 aa20.56■□□□□ 0.88
SSBP4-206ENST00000599699 CHAC2Q8WUX2 184 aa20.56■□□□□ 0.88
SSBP4-206ENST00000599699 C1QTNF4Q9BXJ3 329 aa20.56■□□□□ 0.88
SSBP4-206ENST00000599699 NPCDR1Q9BY65 106 aa20.56■□□□□ 0.88
SSBP4-206ENST00000599699 FCN2Q15485 313 aa20.55■□□□□ 0.88
SSBP4-206ENST00000599699 RNF182Q8N6D2 247 aa20.55■□□□□ 0.88
SSBP4-206ENST00000599699 XCL2Q9UBD3 114 aa20.55■□□□□ 0.88
SSBP4-206ENST00000599699 A0A087X0K7 114 aa20.54■□□□□ 0.88
SSBP4-206ENST00000599699 TRAV8-2A0A0B4J237 113 aa20.54■□□□□ 0.88
SSBP4-206ENST00000599699 RPL12P30050 165 aaKnown RBP20.54■□□□□ 0.88
SSBP4-206ENST00000599699 MORN5Q5VZ52 161 aa20.54■□□□□ 0.88
SSBP4-206ENST00000599699 HSPB11Q9Y547 144 aa20.54■□□□□ 0.88
SSBP4-206ENST00000599699 A0A0J9YX75 114 aa20.53■□□□□ 0.88
SSBP4-206ENST00000599699 SNRPCP09234 159 aaKnown RBP20.53■□□□□ 0.88
SSBP4-206ENST00000599699 FAM78BQ5VT40 261 aa20.53■□□□□ 0.88
SSBP4-206ENST00000599699 ZNF709Q8N972 641 aa20.53■□□□□ 0.88
SSBP4-206ENST00000599699 ZNF738Q8NE65 137 aa20.53■□□□□ 0.88
SSBP4-206ENST00000599699 MRPS12O15235 138 aaKnown RBP20.52■□□□□ 0.88
SSBP4-206ENST00000599699 FXYD7P58549 80 aa20.52■□□□□ 0.88
SSBP4-206ENST00000599699 OR11H7Q8NGC8 314 aa20.52■□□□□ 0.88
SSBP4-206ENST00000599699 ATP5SQ99766 215 aa20.52■□□□□ 0.88
SSBP4-206ENST00000599699 TRAV5A0A0B4J249 113 aa20.51■□□□□ 0.87
SSBP4-206ENST00000599699 SMIM3Q9BZL3 60 aa20.51■□□□□ 0.87
SSBP4-206ENST00000599699 WDR61Q9GZS3 305 aaKnown RBP20.51■□□□□ 0.87
SSBP4-206ENST00000599699 CXorf65A6NEN9 183 aa20.5■□□□□ 0.87
SSBP4-206ENST00000599699 DEFB4AO15263 64 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms