RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 C1orf134Q5TEV5 83 aa10.46□□□□□ -0.73
XRCC1-205ENST00000595789 TMED4Q7Z7H5 227 aa10.46□□□□□ -0.73
XRCC1-205ENST00000595789 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.73
XRCC1-205ENST00000595789 CIB3Q96Q77 187 aaPredicted RBP10.46□□□□□ -0.73
XRCC1-205ENST00000595789 PAIP2BQ9ULR5 123 aaKnown RBP10.46□□□□□ -0.73
XRCC1-205ENST00000595789 TMED3Q9Y3Q3 217 aa10.46□□□□□ -0.73
XRCC1-205ENST00000595789 ZNF705GA8MUZ8 300 aaPredicted RBP10.45□□□□□ -0.74
XRCC1-205ENST00000595789 M0R2Z0 102 aa10.45□□□□□ -0.74
XRCC1-205ENST00000595789 WRBO00258 174 aa10.45□□□□□ -0.74
XRCC1-205ENST00000595789 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
XRCC1-205ENST00000595789 BPIFCQ8NFQ6 507 aa10.45□□□□□ -0.74
XRCC1-205ENST00000595789 GPR82Q96P67 336 aa10.45□□□□□ -0.74
XRCC1-205ENST00000595789 TMEM208Q9BTX3 173 aa10.45□□□□□ -0.74
XRCC1-205ENST00000595789 PLAC8L1A1L4L8 177 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 LYRM9A8MSI8 78 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 H3BMQ9 156 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 DUSP14O95147 198 aaKnown RBP10.44□□□□□ -0.74
XRCC1-205ENST00000595789 SFT2D2O95562 160 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 AZU1P20160 251 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 VAMP1P23763 118 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 TSPOP30536 169 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 FAM3BP58499 235 aaPredicted RBP10.44□□□□□ -0.74
XRCC1-205ENST00000595789 PPP1R1AQ13522 171 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 SPINK13Q1W4C9 94 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 SOHLH1Q5JUK2 328 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 RNF182Q8N6D2 247 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 DNAH5Q8TE73 4624 aa10.44□□□□□ -0.74
XRCC1-205ENST00000595789 H3BRN7 92 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 HOXB5P09067 269 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 FAUP35544 74 aaKnown RBP10.43□□□□□ -0.74
XRCC1-205ENST00000595789 RPP30P78346 268 aaKnown RBP10.43□□□□□ -0.74
XRCC1-205ENST00000595789 ID3Q02535 119 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 SPANXN5Q5MJ07 72 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 ACOT7LQ6ZUV0 252 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 TMEM144Q7Z5S9 345 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 MCFD2Q8NI22 146 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 SLC25A21Q9BQT8 299 aaPredicted RBP10.43□□□□□ -0.74
XRCC1-205ENST00000595789 SHANK2-AS3Q9BTD1 123 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 TMEM147Q9BVK8 224 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 SLC25A39Q9BZJ4 359 aaPredicted RBP10.43□□□□□ -0.74
XRCC1-205ENST00000595789 V9GYH0 126 aa10.43□□□□□ -0.74
XRCC1-205ENST00000595789 PMS2P5A8MQ11 134 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 H3BP45 60 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 INSP01308 110 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 B2MP61769 119 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 FCN2Q15485 313 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 BAP18Q8IXM2 172 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 TOMM5Q8N4H5 51 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
XRCC1-205ENST00000595789 STRAPQ9Y3F4 350 aaKnown RBP10.42□□□□□ -0.74
XRCC1-205ENST00000595789 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
XRCC1-205ENST00000595789 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 AP3S2P59780 193 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 PLP1P60201 277 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 AKR1C1Q04828 323 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 TNP2Q05952 138 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 CYP2G1PQ6ZSU1 146 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 DEDD2Q8WXF8 326 aa10.41□□□□□ -0.74
XRCC1-205ENST00000595789 NBDYA0A0U1RRE5 68 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 BOLA2-SMG1P6H3BVE0 249 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 CXCL3P19876 107 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 S100A7P31151 101 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 FGL1Q08830 312 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 PYDC2Q56P42 97 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 OR8A1Q8NGG7 326 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 HIGD1AQ9Y241 93 aa10.4□□□□□ -0.74
XRCC1-205ENST00000595789 A0A087X0K7 114 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
XRCC1-205ENST00000595789 HYPMO75409 117 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 ADAP1O75689 374 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 IL5P05113 134 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 RPL7P18124 248 aaKnown RBP10.39□□□□□ -0.75
XRCC1-205ENST00000595789 POLR2GP62487 172 aaKnown RBP eCLIP10.39□□□□□ -0.75
XRCC1-205ENST00000595789 PSG3Q16557 428 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 PATE2Q6UY27 113 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 ZNF738Q8NE65 137 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 ATG101Q9BSB4 218 aa10.39□□□□□ -0.75
XRCC1-205ENST00000595789 C9orf170A2RU37 121 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 CBY3A6NI87 242 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 F5H768 121 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 CCNKO75909 580 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 ATP5G1P05496 136 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 ATP5G3P48201 142 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 TAS2R60P59551 318 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 UBE2MP61081 183 aaKnown RBP10.38□□□□□ -0.75
XRCC1-205ENST00000595789 RAP2BP61225 183 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 HIST1H1AQ02539 215 aaPredicted RBP10.38□□□□□ -0.75
XRCC1-205ENST00000595789 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 LINC01587Q99440 93 aa10.38□□□□□ -0.75
XRCC1-205ENST00000595789 SMCO3A2RU48 225 aa10.37□□□□□ -0.75
XRCC1-205ENST00000595789 K7EPK0 472 aa10.37□□□□□ -0.75
XRCC1-205ENST00000595789 NUDT3O95989 172 aa10.37□□□□□ -0.75
XRCC1-205ENST00000595789 LINC00869P0C866 280 aa10.37□□□□□ -0.75
XRCC1-205ENST00000595789 PRB4P10163 310 aaPredicted RBP10.37□□□□□ -0.75
XRCC1-205ENST00000595789 SELENOTP62341 195 aa10.37□□□□□ -0.75
XRCC1-205ENST00000595789 TMEM14EPQ6UXP3 125 aa10.37□□□□□ -0.75
XRCC1-205ENST00000595789 CCDC190Q86UF4 302 aa10.37□□□□□ -0.75
XRCC1-205ENST00000595789 TMEM256Q8N2U0 113 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms