RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 CYB5BO43169 146 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 PROSCO94903 275 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 IFNA6P05013 189 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 SMIM17P0DL12 118 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 SSR2P43308 183 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 RAB4BP61018 213 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 TSNQ15631 228 aaKnown RBP0.98□□□□□ -2.25
SMAD4-207ENST00000589076 Q6Q795 121 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 LCA10Q71F78 164 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 OR13D1Q8NGV5 346 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 SLC25A40Q8TBP6 338 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 GNPDA2Q8TDQ7 276 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 FAM172AQ8WUF8 416 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 ITFG2Q969R8 447 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 CHMP6Q96FZ7 201 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 HIST1H2BLQ99880 126 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 SLC35A3Q9Y2D2 325 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 ARL2BPQ9Y2Y0 163 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 FMN1Q68DA7 1419 aa0.98□□□□□ -2.25
SMAD4-207ENST00000589076 MCM3APO60318 1980 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 NUP210LQ5VU65 1888 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 PLXNA4Q9HCM2 1894 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 C1orf196B1AJZ1 125 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 SULT1B1O43704 296 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 HYPMO75409 117 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 UBL3O95164 117 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 MGST1P10620 155 aaKnown RBP0.97□□□□□ -2.25
SMAD4-207ENST00000589076 KRTAP10-4P60372 401 aaPredicted RBP0.97□□□□□ -2.25
SMAD4-207ENST00000589076 LYRM7Q5U5X0 104 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 OR8D4Q8NGM9 314 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 OR10J5Q8NHC4 309 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 WFDC5Q8TCV5 224 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 ADAT3Q96EY9 351 aaPredicted RBP0.97□□□□□ -2.25
SMAD4-207ENST00000589076 LAMA1P25391 3075 aa0.97□□□□□ -2.25
SMAD4-207ENST00000589076 DCHS2Q6V1P9 2916 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 SCN8AQ9UQD0 1980 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 TRAV4A0A0B4J268 109 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 IGKV1-9A0A0C4DH69 117 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 CST2P09228 141 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 ERP29P30040 261 aaKnown RBP0.96□□□□□ -2.26
SMAD4-207ENST00000589076 RHOBP62745 196 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 RNASE10Q5GAN6 216 aaKnown RBP0.96□□□□□ -2.26
SMAD4-207ENST00000589076 OR2T10Q8NGZ9 312 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 SFT2D1Q8WV19 159 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 ODF3Q96PU9 254 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 MRPL57Q9BQC6 102 aaKnown RBP0.96□□□□□ -2.26
SMAD4-207ENST00000589076 PARVBQ9HBI1 364 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 KLK9Q9UKQ9 250 aa0.96□□□□□ -2.26
SMAD4-207ENST00000589076 FAM32AQ9Y421 112 aaKnown RBP0.96□□□□□ -2.26
SMAD4-207ENST00000589076 MAP1AP78559 2803 aaPredicted RBP0.96□□□□□ -2.26
SMAD4-207ENST00000589076 SPENQ96T58 3664 aaKnown RBP0.95□□□□□ -2.26
SMAD4-207ENST00000589076 TRAV12-1A0A0B4J245 112 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 FAM159BA6NKW6 160 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 LYZL6O75951 148 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 SERPINA1P01009 418 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 CYBAP13498 195 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 MRPS15P82914 257 aaKnown RBP0.95□□□□□ -2.26
SMAD4-207ENST00000589076 TMED2Q15363 201 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 BRMS1LQ5PSV4 323 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 OR11H6Q8NGC7 330 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 TEX47Q8TBZ9 253 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 TMEM133Q9H2Q1 129 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 ENY2Q9NPA8 101 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 ADGRL3Q9HAR2 1447 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 MYLKQ15746 1914 aa0.95□□□□□ -2.26
SMAD4-207ENST00000589076 NUP98P52948 1817 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 BCL9LQ86UU0 1499 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 NCOA6Q14686 2063 aaPredicted RBP0.94□□□□□ -2.26
SMAD4-207ENST00000589076 TRBV19A0A075B6N1 114 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 LOC110117498A0A087WWA1 95 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 TRAV3A0A0B4J244 114 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 HSD11B1P28845 292 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 SRIP30626 198 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 PIGPP57054 158 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 DEFA3P59666 94 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 EIF5AP63241 154 aaKnown RBP0.94□□□□□ -2.26
SMAD4-207ENST00000589076 MRPS25P82663 173 aaKnown RBP0.94□□□□□ -2.26
SMAD4-207ENST00000589076 ESRGQ1W209 222 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 DEFB115Q30KQ5 88 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 LINC00301Q8NCQ3 95 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 C14orf132Q9NPU4 83 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 RASL12Q9NYN1 266 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 UTP11Q9Y3A2 253 aaKnown RBP0.94□□□□□ -2.26
SMAD4-207ENST00000589076 DOCK4Q8N1I0 1966 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 CENPEQ02224 2701 aa0.94□□□□□ -2.26
SMAD4-207ENST00000589076 MYH2Q9UKX2 1941 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 CUBNO60494 3623 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 PEAK1Q9H792 1746 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 ADGRB2O60241 1585 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 RNASE4P34096 147 aaKnown RBP0.93□□□□□ -2.26
SMAD4-207ENST00000589076 SRP14P37108 136 aaKnown RBP0.93□□□□□ -2.26
SMAD4-207ENST00000589076 SERPINB9P50453 376 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 GOLT1AQ6ZVE7 132 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 OR10X1Q8NGY0 326 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 ZNF418Q8TF45 676 aaPredicted RBP0.93□□□□□ -2.26
SMAD4-207ENST00000589076 YPEL2Q96QA6 119 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 LINC00467Q9BRT7 94 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 OPTCQ9UBM4 332 aa0.93□□□□□ -2.26
SMAD4-207ENST00000589076 KIAA1549Q9HCM3 1950 aa0.92□□□□□ -2.26
SMAD4-207ENST00000589076 ZNF469Q96JG9 3925 aaPredicted RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms