RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 LINC00612Q8N6U2 182 aa9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 OR4D5Q8NGN0 318 aa9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 RNASE8Q8TDE3 154 aaKnown RBP9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 PRRT1Q99946 306 aa9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 SLC25A39Q9BZJ4 359 aaPredicted RBP9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 SLC25A22Q9H936 323 aa9.56□□□□□ -0.88
CLPTM1-208ENST00000588274 ANKRD20A5PA0PJZ0 165 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 CBY3A6NI87 242 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 H3BRN7 92 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 BOLA2-SMG1P6H3BVE0 249 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 CTDSP2O14595 271 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 CTDSPLO15194 276 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 FABP1P07148 127 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 SMIM18P0DKX4 95 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 CCL18P55774 89 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 Q6ZRN7 208 aaPredicted RBP9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 PPP1R14BQ96C90 147 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
CLPTM1-208ENST00000588274 DUSP14O95147 198 aaKnown RBP9.54□□□□□ -0.88
CLPTM1-208ENST00000588274 IAPPP10997 89 aa9.54□□□□□ -0.88
CLPTM1-208ENST00000588274 B2MP61769 119 aa9.54□□□□□ -0.88
CLPTM1-208ENST00000588274 GPR141Q7Z602 305 aa9.54□□□□□ -0.88
CLPTM1-208ENST00000588274 CLVS1Q8IUQ0 354 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-208ENST00000588274 OR1B1Q8NGR6 318 aa9.54□□□□□ -0.88
CLPTM1-208ENST00000588274 Q9H8V8 135 aa9.54□□□□□ -0.88
CLPTM1-208ENST00000588274 CFDP00746 253 aaPredicted RBP9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 PRB4P10163 310 aaPredicted RBP9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 CXCL3P19876 107 aa9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 HOXA5P20719 270 aa9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 TAS2R60P59551 318 aa9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 OR1S1Q8NH92 325 aa9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 C16orf74Q96GX8 76 aa9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 GPR82Q96P67 336 aa9.53□□□□□ -0.88
CLPTM1-208ENST00000588274 MRPS12O15235 138 aaKnown RBP9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 AKR1C4P17516 323 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 KIR3DS1Q14943 382 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 GGNBP1Q5YKI7 109 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 TMEM256Q8N2U0 113 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 OR8A1Q8NGG7 326 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 ZNF503Q96F45 646 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 UHRF2Q96PU4 802 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 SHANK2-AS3Q9BTD1 123 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.89
CLPTM1-208ENST00000588274 TRAV26-1A0A087WT03 109 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 A0A087X0K7 114 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 DUXBA0A1W2PPF3 345 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 A0A1W2PPQ1 181 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 SLC25A6P12236 298 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 ORM2P19652 201 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 SRPXP78539 464 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 SPCS2Q15005 226 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 ESRGQ1W209 222 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 TTC32Q5I0X7 151 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 ACOT7LQ6ZUV0 252 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 LRTM2Q8N967 370 aa9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 TMEM263Q8WUH6 116 aaKnown RBP9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 NOP10Q9NPE3 64 aaKnown RBP9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 TIMM8BQ9Y5J9 83 aaPredicted RBP9.51□□□□□ -0.89
CLPTM1-208ENST00000588274 ZNF701M0R085 212 aaPredicted RBP9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 RGS5O15539 181 aa9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 PLP1P60201 277 aa9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 RAB11AP62491 216 aa9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 BPIFCQ8NFQ6 507 aa9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 RXFP4Q8TDU9 374 aa9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 TMEM147Q9BVK8 224 aa9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
CLPTM1-208ENST00000588274 PMS2P5A8MQ11 134 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 XGP55808 180 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 IL18Q14116 193 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 CLINT1Q14677 625 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 ZNF493Q6ZR52 646 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 LINC01587Q99440 93 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 SOSTQ9BQB4 213 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 SCP2D1Q9UJQ7 156 aa9.49□□□□□ -0.89
CLPTM1-208ENST00000588274 H3BNG1 76 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 H3BP45 60 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 SYNGR2O43760 224 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 M6PRP20645 277 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 CDKN1BP46527 198 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 LINC00315P59091 139 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 PSG3Q16557 428 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 PATE2Q6UY27 113 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 ZBTB8BQ8NAP8 495 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 TRIM63Q969Q1 353 aa9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 GNPNAT1Q96EK6 184 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 PARD6GQ9BYG4 376 aaPredicted RBP9.48□□□□□ -0.89
CLPTM1-208ENST00000588274 A0A0J9YY99 117 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 ANXA3P12429 323 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 RPL7P18124 248 aaKnown RBP9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 FGL1Q08830 312 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 GFI1BQ5VTD9 330 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 CYP2G1PQ6ZSU1 146 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 ZNF586Q9NXT0 402 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms