RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 IGLV2-11P01706 119 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 LIPFP07098 398 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 SRSF12Q8WXF0 261 aaKnown RBP13.89□□□□□ -0.19
SCARF1-205ENST00000571272 TPPP3Q9BW30 176 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 TMEM133Q9H2Q1 129 aa13.89□□□□□ -0.19
SCARF1-205ENST00000571272 ANKRD11Q6UB99 2663 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-205ENST00000571272 A0A0G2JNJ9 132 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 NPIPB6E9PJ23 425 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 C8orf31Q8N9H6 132 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 FBXL15Q9H469 300 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 OTORQ9NRC9 128 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 Q9UFV3 132 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 IGHV2-70DA0A0C4DH43 119 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 APOHP02749 345 aaPredicted RBP13.88□□□□□ -0.19
SCARF1-205ENST00000571272 THBDP07204 575 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 ARMS2P0C7Q2 107 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 IGLC1P0CG04 106 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 RBX1P62877 108 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 IGFL3Q6UXB1 125 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 FAM57AQ8TBR7 257 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 INSIG2Q9Y5U4 225 aa13.88□□□□□ -0.19
SCARF1-205ENST00000571272 F11RQ9Y624 299 aaKnown RBP13.88□□□□□ -0.19
SCARF1-205ENST00000571272 MUC21A0A0G2JKD1 596 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 MUC21A0A140T8X8 626 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 ZNF785A8K8V0 405 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 MUC21Q5SSG8 566 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 PVRIGQ6DKI7 326 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 C1RLQ9NZP8 487 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 CSMD1Q96PZ7 3565 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 HAX1O00165 279 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 PLP1P60201 277 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 PPP1R27Q86WC6 154 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 ZC2HC1AQ96GY0 325 aa13.87□□□□□ -0.19
SCARF1-205ENST00000571272 TEX22C9J3V5 150 aa13.86□□□□□ -0.19
SCARF1-205ENST00000571272 BVES-AS1Q5T3Y7 98 aa13.86□□□□□ -0.19
SCARF1-205ENST00000571272 RASL11BQ9BPW5 248 aa13.86□□□□□ -0.19
SCARF1-205ENST00000571272 DYNLRB1Q9NP97 96 aa13.86□□□□□ -0.19
SCARF1-205ENST00000571272 AKAP13Q12802 2813 aa13.86□□□□□ -0.19
SCARF1-205ENST00000571272 CBY3A6NI87 242 aa13.86□□□□□ -0.19
SCARF1-205ENST00000571272 CRYGBP07316 175 aa13.86□□□□□ -0.19
SCARF1-205ENST00000571272 RNASE6Q93091 150 aaKnown RBP13.86□□□□□ -0.19
SCARF1-205ENST00000571272 A0A087X0K7 114 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 A0A1B0GUT8 65 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 FAM231BA6NCW3 169 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 TAX1BP3O14907 124 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 SNAI2O43623 268 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 OR5AL1P0C617 328 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 NEU4Q8WWR8 484 aaPredicted RBP13.85□□□□□ -0.19
SCARF1-205ENST00000571272 COX7A1P24310 79 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 ASCL5Q7RTU5 278 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 SCRT2Q9NQ03 307 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 BSNQ9UPA5 3926 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 IGHV1-3A0A0C4DH29 117 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 OR2T8A6NH00 312 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 OVOL3O00110 214 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 PET117Q6UWS5 81 aa13.85□□□□□ -0.19
SCARF1-205ENST00000571272 PLGLAQ15195 96 aa13.84□□□□□ -0.19
SCARF1-205ENST00000571272 HSPB8Q9UJY1 196 aa13.84□□□□□ -0.19
SCARF1-205ENST00000571272 LYNX1G3V0Z9 82 aa13.84□□□□□ -0.19
SCARF1-205ENST00000571272 IGKV1-17P01599 117 aa13.84□□□□□ -0.19
SCARF1-205ENST00000571272 LYNX1P0DP58 116 aa13.84□□□□□ -0.19
SCARF1-205ENST00000571272 FOXE3Q13461 319 aa13.84□□□□□ -0.19
SCARF1-205ENST00000571272 AP5S1Q9NUS5 200 aa13.84□□□□□ -0.19
SCARF1-205ENST00000571272 RNF151Q2KHN1 245 aa13.83□□□□□ -0.2
SCARF1-205ENST00000571272 RNF24Q9Y225 148 aa13.83□□□□□ -0.2
SCARF1-205ENST00000571272 S4R3C0 116 aa13.83□□□□□ -0.2
SCARF1-205ENST00000571272 I3L2K1 104 aa13.83□□□□□ -0.2
SCARF1-205ENST00000571272 K7EP13 123 aa13.83□□□□□ -0.2
SCARF1-205ENST00000571272 HLA-DRB1P01911 266 aa13.83□□□□□ -0.2
SCARF1-205ENST00000571272 NGBQ9NPG2 151 aa13.83□□□□□ -0.2
SCARF1-205ENST00000571272 M0R3E3 92 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 TMEM14CQ9P0S9 112 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 ABCA4P78363 2273 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 NCR2O95944 276 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 IGLV1-47P01700 117 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 FAM106CPP0CH98 169 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 FAM106AQ4KMX7 169 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 PRSS3P2Q8NHM4 247 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 KAAG1Q9UBP8 84 aa13.82□□□□□ -0.2
SCARF1-205ENST00000571272 TRBV19A0A075B6N1 114 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 TRAV30A0A087WSZ9 112 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 BUB1B-PAK6H3BSN5 160 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 CNIH1O95406 144 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 RIGQ13278 110 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 IGFBPL1Q8WX77 278 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 PSG8Q9UQ74 426 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 TMSB15BA0A087X1C1 80 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 A0A1W2PRD5 423 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 A0A1W2PRF3 423 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 A0A1W2PRM7 423 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 KLK10O43240 276 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 HOXB4P17483 251 aaPredicted RBP13.81□□□□□ -0.2
SCARF1-205ENST00000571272 CRIP1P50238 77 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 ARF6P62330 175 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 RBPJQ06330 500 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 C16orf54Q6UWD8 224 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 C12orf54Q6X4T0 127 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 BPIFA4PQ86YQ2 179 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 DEFB125Q8N687 156 aa13.81□□□□□ -0.2
SCARF1-205ENST00000571272 LOC389332A0A1B0GUA5 103 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms