RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TCTEX1D1Q8N7M0 179 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 BPIFB6Q8NFQ5 453 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 OR10W1Q8NGF6 305 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 DNAJC9Q8WXX5 260 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 NRBF2Q96F24 287 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CENPNQ96H22 339 aaPredicted RBP1.61□□□□□ -2.15
SCFD1-219ENST00000556413 RNF2Q99496 336 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 RARRES2Q99969 163 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CMSS1Q9BQ75 279 aaKnown RBP1.61□□□□□ -2.15
SCFD1-219ENST00000556413 GINS4Q9BRT9 223 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 NIPSNAP3BQ9BS92 247 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 AGMATQ9BSE5 352 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 LPAR5Q9H1C0 372 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 NCOR1P1Q9H4R4 102 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 SPACA1Q9HBV2 294 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 HRASLSQ9HDD0 168 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 PLEKHJ1Q9NW61 149 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 BABAM2Q9NXR7 383 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 PIPOXQ9P0Z9 390 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 CKLFQ9UBR5 152 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 APLNQ9ULZ1 77 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 ORC6Q9Y5N6 252 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
SCFD1-219ENST00000556413 TNCP24821 2201 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 FAT3Q8TDW7 4589 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 IGLV11-55A0A075B6I3 123 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TRBV9A0A0B4J1U6 114 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM235A6NFC5 223 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 FAM223BA6NKX1 122 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM14DPA8MWL7 114 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 C16orf90A8MZG2 172 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 ANKRD65E5RJM6 399 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 H3BUA1 57 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TGOLN2O43493 480 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 RBBP9O75884 186 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 IFNA4P05014 189 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF688P0C7X2 276 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 CD37P11049 281 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 DEFA4P12838 97 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 PSMB6P28072 239 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 BMI1P35226 326 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 MAS1LP35410 378 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 PSMD7P51665 324 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 DEFB131AP59861 70 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 UBE2KP61086 200 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 QRFPP83859 136 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 ST3GAL4Q11206 333 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TMED1Q13445 227 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 CDK10Q15131 360 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 RAB11BQ15907 218 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 RTL8BQ17RB0 113 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM183BQ1AE95 376 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 KRTAP13-2Q52LG2 175 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 ACSM3Q53FZ2 586 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 HSD17B12Q53GQ0 312 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 Q56UQ5 140 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 YIF1BQ5BJH7 314 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 ACTL10Q5JWF8 245 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 SLC25A24Q6NUK1 477 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 PLET1Q6UQ28 207 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TMPRSS11AQ6ZMR5 421 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 CAMK2N1Q7Z7J9 78 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 FAM223AQ8IWN6 122 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TMEM183AQ8IXX5 376 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 TTC9CQ8N5M4 171 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 Q8NAQ8 132 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 OR2K2Q8NGT1 345 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 OR51H1Q8NH63 302 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 OR4A5Q8NH83 315 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 OR10J5Q8NHC4 309 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 ZNF502Q8TBZ5 544 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 EEF1AKMT3Q96AZ1 226 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 CPNE2Q96FN4 548 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-219ENST00000556413 MRPL48Q96GC5 212 aaKnown RBP1.6□□□□□ -2.15
SCFD1-219ENST00000556413 USMG5Q96IX5 58 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 SPIN2AQ99865 258 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 SPIN2BQ9BPZ2 258 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 RHOFQ9HBH0 211 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 FGF20Q9NP95 211 aaPredicted RBP1.6□□□□□ -2.15
SCFD1-219ENST00000556413 C12orf4Q9NQ89 552 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 MRPL36Q9P0J6 103 aaKnown RBP1.6□□□□□ -2.15
SCFD1-219ENST00000556413 RABAC1Q9UI14 185 aa1.6□□□□□ -2.15
SCFD1-219ENST00000556413 RPL36Q9Y3U8 105 aaKnown RBP1.6□□□□□ -2.15
SCFD1-219ENST00000556413 SORL1Q92673 2214 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 DEFB131BA0A096LNP1 70 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 TRBV6-7A0A0A0MS04 114 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 IGLC7A0M8Q6 106 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 COLCA2A8K830 154 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 A8MWP6 167 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 MFNGO00587 321 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 DENRO43583 198 aaKnown RBP1.59□□□□□ -2.15
SCFD1-219ENST00000556413 TLX1NBP0CAT3 122 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 OR13C7P0DN81 318 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 HIST1H1DP16402 221 aaKnown RBP1.59□□□□□ -2.15
SCFD1-219ENST00000556413 HLA-GP17693 338 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 SRMP19623 302 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 DCKP27707 260 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 CALRP27797 417 aaKnown RBP1.59□□□□□ -2.15
SCFD1-219ENST00000556413 G6PCP35575 357 aa1.59□□□□□ -2.15
SCFD1-219ENST00000556413 TGFBR1P36897 503 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 248.3 ms