RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ZNF106Q9H2Y7 1883 aaKnown RBP1.59□□□□□ -2.15
SYNE2-210ENST00000553455 A0A0D9SG52 128 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 TMEM210A6NLX4 147 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 SERPINE1P05121 402 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 SPI1P17947 270 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 CDK5R1Q15078 307 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 RPS19BP1Q86WX3 136 aaKnown RBP1.59□□□□□ -2.15
SYNE2-210ENST00000553455 KRT222Q8N1A0 295 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 SIGLECL1Q8N7X8 197 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 OR52L1Q8NGH7 329 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 OR5A1Q8NGJ0 315 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 OR51A2Q8NGJ7 313 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 RETNLBQ9BQ08 111 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 MYH3P11055 1940 aa1.59□□□□□ -2.15
SYNE2-210ENST00000553455 LRRC37AA6NMS7 1700 aa1.59□□□□□ -2.16
SYNE2-210ENST00000553455 DDX60Q8IY21 1712 aaKnown RBP1.59□□□□□ -2.16
SYNE2-210ENST00000553455 INTS1Q8N201 2190 aaKnown RBP1.59□□□□□ -2.16
SYNE2-210ENST00000553455 LAMB2P55268 1798 aa1.59□□□□□ -2.16
SYNE2-210ENST00000553455 PSME4Q14997 1843 aa1.59□□□□□ -2.16
SYNE2-210ENST00000553455 MED23Q9ULK4 1368 aa1.59□□□□□ -2.16
SYNE2-210ENST00000553455 hCG_1818297A0A087WSY0 165 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 A8MT66 165 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 IFNA6P05013 189 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 LINC01554Q52M75 96 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 DPPA3Q6W0C5 159 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 OOSP2Q86WS3 158 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 HIST3H2BBQ8N257 126 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 SIGMAR1Q99720 223 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 DUOX1Q9NRD9 1551 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 MED12LQ86YW9 2145 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 COL4A5P29400 1685 aa1.58□□□□□ -2.16
SYNE2-210ENST00000553455 IGKV3D-7A0A0C4DH55 119 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 IGKV3OR2-268A0A0C4DH90 116 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 OR5F1O95221 314 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 COX6A1P12074 109 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 RNASE3P12724 160 aaKnown RBP1.57□□□□□ -2.16
SYNE2-210ENST00000553455 REEP5Q00765 189 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 KHDC3LQ587J8 217 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 C10orf55Q5SWW7 151 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 OR4D11Q8NGI4 311 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 MED9Q9NWA0 146 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 AKAP11Q9UKA4 1901 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 TNRC6CQ9HCJ0 1690 aaKnown RBP1.57□□□□□ -2.16
SYNE2-210ENST00000553455 LAMB1P07942 1786 aa1.57□□□□□ -2.16
SYNE2-210ENST00000553455 TRPM7Q96QT4 1865 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 DOCK3Q8IZD9 2030 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 OR7C1O76099 320 aaPredicted RBP1.56□□□□□ -2.16
SYNE2-210ENST00000553455 TCL1BO95988 128 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 C8GP07360 202 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 RHEBQ15382 184 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 DEFB115Q30KQ5 88 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 OR4E2Q8NGC2 313 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 SLC25A40Q8TBP6 338 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 C10orf105Q8TEF2 133 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 C2orf50Q96LR7 162 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 SLC50A1Q9BRV3 221 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 REG4Q9BYZ8 158 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 OSTCQ9NRP0 149 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 PLXND1Q9Y4D7 1925 aa1.56□□□□□ -2.16
SYNE2-210ENST00000553455 COL1A1P02452 1464 aaPredicted RBP1.56□□□□□ -2.16
SYNE2-210ENST00000553455 C19orf84I3L1E1 186 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 ANGP03950 147 aaKnown RBP1.55□□□□□ -2.16
SYNE2-210ENST00000553455 SMIM17P0DL12 118 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 PPIBP23284 216 aaKnown RBP1.55□□□□□ -2.16
SYNE2-210ENST00000553455 HOXA6P31267 233 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 ANP32AP39687 249 aaKnown RBP1.55□□□□□ -2.16
SYNE2-210ENST00000553455 DEFA3P59666 94 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 KRTAP10-4P60372 401 aaPredicted RBP1.55□□□□□ -2.16
SYNE2-210ENST00000553455 SPA17Q15506 151 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 SURF2Q15527 256 aaPredicted RBP1.55□□□□□ -2.16
SYNE2-210ENST00000553455 ALX1Q15699 326 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 AKIRIN2Q53H80 203 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 Q6Q795 121 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 DGCR14Q96DF8 476 aaKnown RBP1.55□□□□□ -2.16
SYNE2-210ENST00000553455 MIXL1Q9H2W2 232 aa1.55□□□□□ -2.16
SYNE2-210ENST00000553455 SPTBN5Q9NRC6 3674 aaKnown RBP1.55□□□□□ -2.16
SYNE2-210ENST00000553455 A0A1B0GUL6 1792 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 ECM29Q5VYK3 1845 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 SCN10AQ9Y5Y9 1956 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 TNRC18O15417 2968 aaPredicted RBP1.54□□□□□ -2.16
SYNE2-210ENST00000553455 CENPFP49454 3210 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 OR2T1O43869 369 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 ASAH2BP0C7U1 165 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 S100A4P26447 101 aaKnown RBP1.54□□□□□ -2.16
SYNE2-210ENST00000553455 CASP1P29466 404 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 LCA10Q71F78 164 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 TRAPPC6BQ86SZ2 158 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 WFDC5Q8TCV5 224 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 AQP3Q92482 292 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 ADAT3Q96EY9 351 aaPredicted RBP1.54□□□□□ -2.16
SYNE2-210ENST00000553455 SERPINI1Q99574 410 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 CRCT1Q9UGL9 99 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 RFX7Q2KHR2 1363 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 HTTP42858 3142 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 TIAM2Q8IVF5 1701 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 MYH2Q9UKX2 1941 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 ARFGEF3Q5TH69 2177 aa1.54□□□□□ -2.16
SYNE2-210ENST00000553455 TRAV14DV4A0A0A6YYC5 116 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 FUOMA2VDF0 154 aa1.53□□□□□ -2.16
SYNE2-210ENST00000553455 FAM159BA6NKW6 160 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms