RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 UFC1Q9Y3C8 167 aa1.65□□□□□ -2.15
LEMD3-206ENST00000545026 TNS3Q68CZ2 1445 aa1.65□□□□□ -2.15
LEMD3-206ENST00000545026 SCN3AQ9NY46 2000 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 TLCD2A6NGC4 264 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 APOA2P02652 100 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 ZNF25P17030 456 aaPredicted RBP1.64□□□□□ -2.15
LEMD3-206ENST00000545026 OGNP20774 298 aaKnown RBP1.64□□□□□ -2.15
LEMD3-206ENST00000545026 G0S2P27469 103 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 C4orf22Q6V702 233 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 ZHX1-C8orf76Q96EF9 292 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 MALSU1Q96EH3 234 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 TP53RKQ96S44 253 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 TMEM70Q9BUB7 260 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 GID8Q9NWU2 228 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 TAS2R7Q9NYW3 318 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 DOCK4Q8N1I0 1966 aa1.64□□□□□ -2.15
LEMD3-206ENST00000545026 E5RI56 91 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 E7EUB6 86 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 IGLV1-51P01701 117 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 CXCL1P09341 107 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 GNG10P50151 68 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 FAM74A1Q5RGS3 127 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 C1orf134Q5TEV5 83 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 C2orf82Q6UX34 121 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 ZNF833PQ6ZTB9 187 aa1.63□□□□□ -2.15
LEMD3-206ENST00000545026 MYH10P35580 1976 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 TRAV10A0A0B4J240 114 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 TRBV6-4A0A1B0GX49 114 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 CCL25O15444 150 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 IFNA14P01570 189 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 CSN2P05814 226 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 ARPP19P56211 112 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 SPRNQ5BIV9 151 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 POP5Q969H6 163 aaKnown RBP1.62□□□□□ -2.15
LEMD3-206ENST00000545026 BORCS5Q969J3 196 aa1.62□□□□□ -2.15
LEMD3-206ENST00000545026 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
LEMD3-206ENST00000545026 KDM6AO15550 1401 aaPredicted RBP1.61□□□□□ -2.15
LEMD3-206ENST00000545026 C17orf112F2Z3M2 114 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 TMBIM6P55061 237 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 TCTAP57738 103 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 KRTAP26-1Q6PEX3 210 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 NUP35Q8NFH5 326 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 OR5D16Q8NGK9 328 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 PPTC7Q8NI37 304 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 NEK7Q8TDX7 302 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 BOLA2Q9H3K6 86 aa1.61□□□□□ -2.15
LEMD3-206ENST00000545026 TNRC6AQ8NDV7 1962 aaKnown RBP1.6□□□□□ -2.15
LEMD3-206ENST00000545026 PIAS1O75925 651 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 CD2P06729 351 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 OR10J4P0C629 311 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 CRYBA4P53673 196 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 GRINAQ7Z429 371 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 IFT20Q8IY31 132 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 LINC00052Q96N35 136 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 ASB4Q9Y574 426 aa1.6□□□□□ -2.15
LEMD3-206ENST00000545026 MCM3APO60318 1980 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 A0A087WSZ3 146 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 ODAMA1E959 279 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 K7ERJ3 54 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 S100A5P33763 92 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 GLRXP35754 106 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 CDK6Q00534 326 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 MSMO1Q15800 293 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 OR4K15Q8NH41 348 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 PLEKHB2Q96CS7 222 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 ZNF714Q96N38 554 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 BIN3Q9NQY0 253 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 ORMDL1Q9P0S3 153 aa1.59□□□□□ -2.15
LEMD3-206ENST00000545026 LAMB4A4D0S4 1761 aa1.59□□□□□ -2.16
LEMD3-206ENST00000545026 NUP98P52948 1817 aa1.59□□□□□ -2.16
LEMD3-206ENST00000545026 CD109Q6YHK3 1445 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 IGHV1-58A0A0C4DH39 117 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 M0R233 179 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 ERC2-IT1O76042 136 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 DNAL4O96015 105 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 LTC4SQ16873 150 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 C1orf140Q5VVS0 124 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 STX19Q8N4C7 294 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 Q8TAT8 98 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 RAB37Q96AX2 223 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 CHCHD1Q96BP2 118 aaKnown RBP1.58□□□□□ -2.16
LEMD3-206ENST00000545026 MUCL1Q96DR8 90 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 RTL8AQ9BWD3 113 aa1.58□□□□□ -2.16
LEMD3-206ENST00000545026 CACYBPQ9HB71 228 aaKnown RBP1.58□□□□□ -2.16
LEMD3-206ENST00000545026 NCAPD3P42695 1498 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 UBR2Q8IWV8 1755 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 TRAV5A0A0B4J249 113 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 NUPR1O60356 82 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 SERPINB1P30740 379 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 RAB5CP51148 216 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 C3orf33Q6P1S2 294 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 GGACTQ9BVM4 153 aa1.57□□□□□ -2.16
LEMD3-206ENST00000545026 CAMSAP2Q08AD1 1489 aa1.56□□□□□ -2.16
LEMD3-206ENST00000545026 KLRD1Q13241 179 aa1.56□□□□□ -2.16
LEMD3-206ENST00000545026 TRIQKQ629K1 86 aa1.56□□□□□ -2.16
LEMD3-206ENST00000545026 OR52A1Q9UKL2 312 aa1.56□□□□□ -2.16
LEMD3-206ENST00000545026 ROCK1Q13464 1354 aa1.56□□□□□ -2.16
LEMD3-206ENST00000545026 TRPM1Q7Z4N2 1603 aa1.55□□□□□ -2.16
LEMD3-206ENST00000545026 CXCL8P10145 99 aa1.55□□□□□ -2.16
LEMD3-206ENST00000545026 FKBP1CQ5VVH2 108 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms