RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 C9orf163Q8N9P6 203 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 OR8J3Q8NGG0 315 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 OR8D4Q8NGM9 314 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 OR13C4Q8NGS5 318 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 OR10K1Q8NGX5 313 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 OR2T4Q8NH00 348 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 SGMS2Q8NHU3 365 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 ARL11Q969Q4 196 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 MALSU1Q96EH3 234 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 DIRAS2Q96HU8 199 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 AP1S3Q96PC3 154 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 TP53RKQ96S44 253 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 HOPXQ9BPY8 73 aaPredicted RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CMSS1Q9BQ75 279 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 SPANXDQ9BXN6 97 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 CHST6Q9GZX3 395 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 RNF122Q9H9V4 155 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 VPS29Q9UBQ0 182 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 RNF11Q9Y3C5 154 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 MAGI3Q5TCQ9 1506 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 PPLO60437 1756 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 TARBP1Q13395 1621 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 ADCY10Q96PN6 1610 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 EIF2AK4Q9P2K8 1649 aaKnown RBP1.18□□□□□ -2.22
LEMD3-205ENST00000544506 A2MP01023 1474 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 ITSN1Q15811 1721 aa1.18□□□□□ -2.22
LEMD3-205ENST00000544506 DIP2AQ14689 1571 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 MROH2BQ7Z745 1585 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 MAST1Q9Y2H9 1570 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 MYOFQ9NZM1 2061 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 PPRC1Q5VV67 1664 aaKnown RBP1.17□□□□□ -2.22
LEMD3-205ENST00000544506 CASKIN1Q8WXD9 1431 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 ABCC3O15438 1527 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 A0A0D9SFI3 127 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 IRGMA1A4Y4 181 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 F5H768 121 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 CORTO00230 105 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 LYRM1O43325 122 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 SERPINE1P05121 402 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 DBIP07108 87 aaKnown RBP1.17□□□□□ -2.22
LEMD3-205ENST00000544506 SMIM17P0DL12 118 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 FAUP35544 74 aaKnown RBP1.17□□□□□ -2.22
LEMD3-205ENST00000544506 SNCAP37840 140 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 CRYBA4P53673 196 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 NDUFA6P56556 154 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 LSM3P62310 102 aaKnown RBP1.17□□□□□ -2.22
LEMD3-205ENST00000544506 SELENOWP63302 87 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 HIST1H3AP68431 136 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 HBA1P69905 142 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 NCMAPQ5T1S8 102 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 TMEM244Q5VVB8 128 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 RPL22L1Q6P5R6 122 aaKnown RBP1.17□□□□□ -2.22
LEMD3-205ENST00000544506 S100A7AQ86SG5 101 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 OR6V1Q8N148 313 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 UMODL1-AS1Q8N2C9 162 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 LRRC18Q8N456 261 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 TOMM5Q8N4H5 51 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 TCTEX1D1Q8N7M0 179 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 C15orf53Q8NAA6 179 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 ZNF439Q8NDP4 499 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 PLPP5Q8NEB5 264 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 OR5A2Q8NGI9 324 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 RAB8BQ92930 207 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 KCTD7Q96MP8 289 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 CCDC115Q96NT0 180 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 OR52E6Q96RD3 313 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 SIGMAR1Q99720 223 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 ADAT1Q9BUB4 502 aaKnown RBP1.17□□□□□ -2.22
LEMD3-205ENST00000544506 REG4Q9BYZ8 158 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 OR8D2Q9GZM6 311 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 BOLA2Q9H3K6 86 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 BANF2Q9H503 90 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 TAF9BQ9HBM6 251 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 PLEKHJ1Q9NW61 149 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 BET1LQ9NYM9 111 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 COMMD3Q9UBI1 195 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 OPTCQ9UBM4 332 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 SMPXQ9UHP9 88 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 TRAPPC2LQ9UL33 140 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 SLC35A3Q9Y2D2 325 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 COQ4Q9Y3A0 265 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 ABCA9Q8IUA7 1624 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 FLT4P35916 1363 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 CFTRP13569 1480 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 PZPP20742 1482 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 IQSEC2Q5JU85 1478 aa1.17□□□□□ -2.22
LEMD3-205ENST00000544506 MAP2P11137 1827 aaKnown RBP1.17□□□□□ -2.22
LEMD3-205ENST00000544506 CHD3Q12873 2000 aaKnown RBP1.16□□□□□ -2.22
LEMD3-205ENST00000544506 ADGBQ8N7X0 1667 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 C10orf71Q711Q0 1435 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 NINQ8N4C6 2090 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 ABCA6Q8N139 1617 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 IFT172Q9UG01 1749 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 ANKRD26Q9UPS8 1709 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 A0A087WUJ7 227 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 BORCS7-ASMTA0A0B4J1R7 106 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 LOC100130705A0A1B0GUX0 176 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 TCRBV3S1A0A5B6 114 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 MEIS3P1A6NDR6 274 aa1.16□□□□□ -2.22
LEMD3-205ENST00000544506 PRORSD1PA6NEY8 169 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms