RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 NIT1Q86X76 327 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 SNX29P2Q8IUI4 249 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF101Q8IZC7 436 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF555Q8NEP9 628 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 SLC30A7Q8NEW0 376 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 FXYD5Q96DB9 178 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 KCTD7Q96MP8 289 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 TP53RKQ96S44 253 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 ARL6Q9H0F7 186 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 PRO1933Q9H354 126 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 METTL17Q9H7H0 456 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-217ENST00000541578 SND1-IT1Q9HBX3 110 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF230Q9UIE0 474 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-217ENST00000541578 UFC1Q9Y3C8 167 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 CADP27708 2225 aa2.62□□□□□ -1.99
SNHG1-217ENST00000541578 HRNRQ86YZ3 2850 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-217ENST00000541578 IGLV3-12A0A075B6K2 115 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 A0A087X0T9 212 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 TRAV40A0A0B4J280 105 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 IGKV1-6A0A0C4DH72 117 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 CLDN24A6NM45 220 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 FGF16O43320 207 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 OR2T1O43869 369 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 MFSD11O43934 449 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 ARL6IP5O75915 188 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 CDRT1O95170 752 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 IFNA1P01562 189 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 TYMSP04818 313 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 ISG15P05161 165 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 OR13C7P0DN81 318 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 COX6A1P12074 109 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 CMPK1P30085 196 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 OPRM1P35372 400 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 CLDN12P56749 244 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 RHOGP84095 191 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 PLGLB1Q02325 96 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 SMAGPQ0VAQ4 97 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 MLLT11Q13015 90 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-217ENST00000541578 C1DQ13901 141 aaKnown RBP2.61□□□□□ -1.99
SNHG1-217ENST00000541578 FAM53BQ14153 422 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 EBPQ15125 230 aaKnown RBP2.61□□□□□ -1.99
SNHG1-217ENST00000541578 RHEBQ15382 184 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 NEDD8Q15843 81 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF678Q5SXM1 525 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 UNQ9165/PRO28630Q6UXU0 137 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 MUC15Q8N387 334 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 MIR7-3HGQ8N6C7 128 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 OR1P1Q8NH06 330 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 HIST1H2BAQ96A08 127 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 SMIM19Q96E16 107 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 SIGMAR1Q99720 223 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 SPIN2AQ99865 258 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 SPIN2BQ9BPZ2 258 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 PBDC1Q9BVG4 233 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 TMEM38BQ9NVV0 291 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 NOTCH1P46531 2555 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 FREM1Q5H8C1 2179 aa2.61□□□□□ -1.99
SNHG1-217ENST00000541578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.6□□□□□ -1.993e-19■■■■■ 78.9
SNHG1-217ENST00000541578 MED12Q93074 2177 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 MEIKINA0A087WXM9 373 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 MFNGO00587 321 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 MPC2O95563 127 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 EPPINO95925 133 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 IGHV1-46P01743 117 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 MPC1LP0DKB6 136 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 SMIM17P0DL12 118 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 C8orf88P0DMB2 117 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 NTF3P20783 257 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 MP68P56378 58 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 TCTAP57738 103 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 GNG3P63215 75 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 SELENOWP63302 87 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 HMGN3Q15651 99 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 TMEM128Q5BJH2 165 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 CENPWQ5EE01 88 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 LDLRAD2Q5SZI1 272 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 C1orf194Q5T5A4 169 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 XAF1Q6GPH4 301 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 CD200R1LQ6Q8B3 271 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 TOMM20LQ6UXN7 152 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 GLT6D1Q7Z4J2 308 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 DAZ4Q86SG3 579 aaKnown RBP2.6□□□□□ -1.99
SNHG1-217ENST00000541578 ZNF664Q8N3J9 261 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 SMIM20Q8N5G0 67 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 ZFP62Q8NB50 900 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-217ENST00000541578 APCDD1LQ8NCL9 501 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 PLPP5Q8NEB5 264 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 OR4S1Q8NGB4 309 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 OR10D4PQ8NGN7 298 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 OR9I1Q8NGQ6 314 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 JOSD2Q8TAC2 188 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 TEX37Q96LM6 180 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 PEBP4Q96S96 227 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 CCL19Q99731 98 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 SEC11CQ9BY50 192 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 OR2J1Q9GZK6 312 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 FAM60AQ9NP50 221 aa2.6□□□□□ -1.99
SNHG1-217ENST00000541578 DAZ1Q9NQZ3 744 aaKnown RBP2.6□□□□□ -1.99
SNHG1-217ENST00000541578 LYRM2Q9NU23 88 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-217ENST00000541578 SPANXCQ9NY87 97 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms