RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SRSF12Q8WXF0 261 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 PSMG3-AS1Q96PY0 264 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 C7orf69Q9H7B7 122 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 LAMTOR2Q9Y2Q5 125 aa13.53□□□□□ -0.24
PCDHB17P-201ENST00000539533 TRAV40A0A0B4J280 105 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 NCBP2LA6PVI3 153 aaKnown RBP13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 B4DSR2 109 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 TMEM136Q6ZRR5 245 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 Q8N6K4 173 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 ORAOV1Q8WV07 137 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 OSTCQ9NRP0 149 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 HIF1ANQ9NWT6 349 aa13.52□□□□□ -0.24
PCDHB17P-201ENST00000539533 HYPMO75409 117 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 CNIH1O95406 144 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 CD69Q07108 199 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 FXYD3Q14802 87 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 C5orf64Q2M2E5 130 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 TIGITQ495A1 244 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 ZNF503Q96F45 646 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 NRN1Q9NPD7 142 aa13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 TECRQ9NZ01 308 aaKnown RBP13.52□□□□□ -0.25
PCDHB17P-201ENST00000539533 TRAV34A0A0B4J273 112 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGHV1-69DA0A0B4J2H0 117 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGHV1-69P01742 117 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGHV3-48P01763 117 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGLC2P0DOY2 106 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGLC3P0DOY3 106 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGHV4-38-2P0DP08 117 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 TMEM11P17152 192 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 SUB1P53999 127 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 MFAP2P55001 183 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 OR10J3Q5JRS4 329 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 OR2T6Q8NHC8 308 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 FNDC4Q9H6D8 234 aaPredicted RBP13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 ZANQ9Y493 2812 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGKV1OR2-108A0A075B7D4 117 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 GGTLC3B5MD39 225 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 OR7C2O60412 319 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 AMTP48728 403 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 TCL1AP56279 114 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 SLC35B1P78383 322 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 KIAA1644Q3SXP7 199 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 BEX4Q9NWD9 120 aaPredicted RBP13.51□□□□□ -0.25
PCDHB17P-201ENST00000539533 ISLRO14498 428 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 FAM106CPP0CH98 169 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 PMCHP20382 165 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 COX19Q49B96 90 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 Q6ZVH6 145 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 ABCA1O95477 2261 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 RNF223E7ERA6 249 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 AVPP01185 164 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 GATA2P23769 480 aaPredicted RBP13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 RCHY1Q96PM5 261 aa13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 SOX21Q9Y651 276 aaPredicted RBP13.5□□□□□ -0.25
PCDHB17P-201ENST00000539533 A0A1W2PS18 150 aa13.49□□□□□ -0.25
PCDHB17P-201ENST00000539533 ZNF253O75346 499 aa13.49□□□□□ -0.25
PCDHB17P-201ENST00000539533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
PCDHB17P-201ENST00000539533 AMY1AP04745 511 aa13.49□□□□□ -0.25
PCDHB17P-201ENST00000539533 BMPR1BO00238 502 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 HINT1P49773 126 aaPredicted RBP13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 TAS2R45P59539 299 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 UBE2V1Q13404 147 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 Q5PR19 223 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 IBA57Q5T440 356 aaKnown RBP13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 MRPL54Q6P161 138 aaKnown RBP13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 UNQ5815/PRO19632Q6UWF5 114 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 CACNG8Q8WXS5 425 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGF2BP2-AS1Q96M15 143 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 WNT10AQ9GZT5 417 aa13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 MRPL36Q9P0J6 103 aaKnown RBP13.48□□□□□ -0.25
PCDHB17P-201ENST00000539533 SMIM27A0A1W2PRY6 76 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 HLA-DQA1P01909 254 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 MGST1P10620 155 aaKnown RBP13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 SRIP30626 198 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 LINC01356Q8N9X3 169 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 A0A1W2PRE2 83 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 CDKN1BP46527 198 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 PVRIGQ6DKI7 326 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 LRRC75A-AS1Q8N1F1 130 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 Q8N9W7 124 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 C19orf24Q9BVV8 132 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 SERTAD4Q9NUC0 356 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 F11RQ9Y624 299 aaKnown RBP13.47□□□□□ -0.25
PCDHB17P-201ENST00000539533 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 ZNF324O75467 553 aaPredicted RBP13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 NDPQ00604 133 aa13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 KLF17Q5JT82 389 aaPredicted RBP13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 ZNF562Q6V9R5 426 aa13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 GCN1Q92616 2671 aaKnown RBP13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 K7EP13 123 aa13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 C3orf79P0CE67 100 aa13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 ALKBH7Q9BT30 221 aaPredicted RBP13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 COX11Q9Y6N1 276 aa13.46□□□□□ -0.25
PCDHB17P-201ENST00000539533 TOMM40O96008 361 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 C8orf88P0DMB2 117 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 LOXL1Q08397 574 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms