RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CECR2Q9BXF3 1484 aa0.26□□□□□ -2.37
CCDC7-208ENST00000537047 ARHGEF11O15085 1522 aa0.26□□□□□ -2.37
CCDC7-208ENST00000537047 ALPK3Q96L96 1907 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 FAM159BA6NKW6 160 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 M0R233 179 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 M0R378 163 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 CST8O60676 142 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 OR10AG1Q8NH19 301 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 RAB37Q96AX2 223 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 SMR3AQ99954 134 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 CCDC94Q9BW85 323 aaPredicted RBP0.25□□□□□ -2.37
CCDC7-208ENST00000537047 NPCDR1Q9BY65 106 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 ENY2Q9NPA8 101 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 OR52A1Q9UKL2 312 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 ARL2BPQ9Y2Y0 163 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 ZNF462Q96JM2 2506 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 SCN8AQ9UQD0 1980 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 MYH7BA7E2Y1 1941 aa0.25□□□□□ -2.37
CCDC7-208ENST00000537047 CACNA1EQ15878 2313 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 TRAV27A0A087WT01 109 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 HMGB3O15347 200 aaKnown RBP0.24□□□□□ -2.37
CCDC7-208ENST00000537047 CST2P09228 141 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 CTXN2P0C2S0 81 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 RAB5CP51148 216 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 DYNLT3P51808 116 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 ERVS71-1P61550 626 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 HSPE1P61604 102 aaKnown RBP0.24□□□□□ -2.37
CCDC7-208ENST00000537047 SPATA45Q537H7 98 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 C1orf134Q5TEV5 83 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 ATOH7Q8N100 152 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 OR5AS1Q8N127 324 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 EXOC3-AS1Q8N2X6 119 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 OR5D16Q8NGK9 328 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 Q8TAT8 98 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 PLAC8Q9NZF1 115 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 OPTCQ9UBM4 332 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 HSPB8Q9UJY1 196 aa0.24□□□□□ -2.37
CCDC7-208ENST00000537047 MAST4O15021 2626 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 PLXNA4Q9HCM2 1894 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 A0A0D9SG42 100 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 B4DSR2 109 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 JMJD7-PLA2G4BH0Y9G9 81 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 K7EIL1 84 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 TMEM256-PLSCR3K7ERE1 68 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 SERPINA1P01009 418 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
CCDC7-208ENST00000537047 ZC2HC1AQ96GY0 325 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 WFDC10AQ9H1F0 79 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 TCEAL2Q9H3H9 227 aaPredicted RBP0.23□□□□□ -2.37
CCDC7-208ENST00000537047 RNF11Q9Y3C5 154 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
CCDC7-208ENST00000537047 SIP14410 1827 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 RFX7Q2KHR2 1363 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 MYO18AQ92614 2054 aaKnown RBP0.22□□□□□ -2.37
CCDC7-208ENST00000537047 CITO14578 2027 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 AIPO00170 330 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 CYBAP13498 195 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 NFYBP25208 207 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 FOXA3P55318 350 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-208ENST00000537047 REEP5Q00765 189 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 FADDQ13158 208 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 TAF1AQ15573 450 aaPredicted RBP0.22□□□□□ -2.37
CCDC7-208ENST00000537047 ARPINQ7Z6K5 226 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 MNS1Q8NEH6 495 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 POP5Q969H6 163 aaKnown RBP0.22□□□□□ -2.37
CCDC7-208ENST00000537047 HYLS1Q96M11 299 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 C9orf16Q9BUW7 83 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 GGACTQ9BVM4 153 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 POPDC3Q9HBV1 291 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 ARL5AQ9Y689 179 aa0.22□□□□□ -2.37
CCDC7-208ENST00000537047 PHRF1Q9P1Y6 1649 aaKnown RBP0.21□□□□□ -2.38
CCDC7-208ENST00000537047 DUXBA0A1W2PPF3 345 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 NDUFC2O95298 119 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 PPYP01298 95 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 IGLV1-51P01701 117 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 C1QBP02746 253 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 SPINK7P58062 85 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 NCALDP61601 193 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 VBP1P61758 197 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 SCGB2B2Q4G0G5 96 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 GLIPR1L1Q6UWM5 242 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 PATE2Q6UY27 113 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 Q6ZS92 163 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 S100A7AQ86SG5 101 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 OR4K15Q8NH41 348 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 CHCHD1Q96BP2 118 aaKnown RBP0.21□□□□□ -2.38
CCDC7-208ENST00000537047 ZNF714Q96N38 554 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 PHB2Q99623 299 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 ARMC1Q9NVT9 282 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 FAT4Q6V0I7 4981 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 SSPOA2VEC9 5147 aa0.21□□□□□ -2.38
CCDC7-208ENST00000537047 HEATR1Q9H583 2144 aaKnown RBP0.2□□□□□ -2.38
CCDC7-208ENST00000537047 CHD3Q12873 2000 aaKnown RBP0.2□□□□□ -2.38
CCDC7-208ENST00000537047 TRAV23DV6A0A075B6W5 121 aa0.2□□□□□ -2.38
CCDC7-208ENST00000537047 IFNA6P05013 189 aa0.2□□□□□ -2.38
CCDC7-208ENST00000537047 IFNA4P05014 189 aa0.2□□□□□ -2.38
CCDC7-208ENST00000537047 FXYD6P3P58550 94 aa0.2□□□□□ -2.38
CCDC7-208ENST00000537047 MRPS25P82663 173 aaKnown RBP0.2□□□□□ -2.38
CCDC7-208ENST00000537047 IFT20Q8IY31 132 aa0.2□□□□□ -2.38
CCDC7-208ENST00000537047 CACYBPQ9HB71 228 aaKnown RBP0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms