RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 RHODO00212 210 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 UTF1Q5T230 341 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 IGKV1-27A0A075B6S5 117 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 EREGO14944 169 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 SS18Q15532 418 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 IL17RELQ6ZVW7 336 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 VMO1Q7Z5L0 202 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 SHANK2-AS3Q9BTD1 123 aa6.21□□□□□ -1.41
CTNND1-233ENST00000532787 GBF1Q92538 1859 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 A0A087X0K7 114 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 ZNF672Q499Z4 452 aaPredicted RBP6.21□□□□□ -1.42
CTNND1-233ENST00000532787 EXOC3-AS1Q8N2X6 119 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 OR11H6Q8NGC7 330 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 LSM4Q9Y4Z0 139 aaKnown RBP6.21□□□□□ -1.42
CTNND1-233ENST00000532787 HEATR1Q9H583 2144 aaKnown RBP6.21□□□□□ -1.42
CTNND1-233ENST00000532787 TRIP12Q14669 1992 aaPredicted RBP6.21□□□□□ -1.42
CTNND1-233ENST00000532787 hDV102S1A0JD36 115 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 C15orf62A8K5M9 175 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 B5MCH6 92 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 PRSS46E5RG02 174 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 GAGE5Q13069 117 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 GAGE6Q13070 117 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 C3orf36Q3SXR2 165 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 TMEM256Q8N2U0 113 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 VWCEQ96DN2 955 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 F5P12259 2224 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 BUB1B-PAK6H3BSN5 160 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 NTF4P34130 210 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 TAL2Q16559 108 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 CD177Q8N6Q3 437 aa6.21□□□□□ -1.42
CTNND1-233ENST00000532787 NCOR1O75376 2440 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 RNASE2P10153 161 aaKnown RBP6.2□□□□□ -1.42
CTNND1-233ENST00000532787 CDKN1AP38936 164 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 SRSF2Q01130 221 aaKnown RBP6.2□□□□□ -1.42
CTNND1-233ENST00000532787 ZC2HC1BQ5TFG8 222 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 RNF166Q96A37 237 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-233ENST00000532787 SIGLEC9Q9Y336 463 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 A0A0G2JMZ2 1700 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 LRRC37A2A6NM11 1700 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 ZNF664Q8N3J9 261 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 GAFA1Q96PS6 74 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 COL4A5P29400 1685 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 SRRM4A7MD48 611 aaKnown RBP6.2□□□□□ -1.42
CTNND1-233ENST00000532787 RBM3P98179 157 aaKnown RBP6.2□□□□□ -1.42
CTNND1-233ENST00000532787 C17orf82Q86X59 251 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-233ENST00000532787 FGFBP3Q8TAT2 258 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 SCN10AQ9Y5Y9 1956 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 F8W1H4 67 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 NPSP0C0P6 89 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 C6orf226Q5I0X4 101 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 Q8N8P6 123 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 UBE2WQ96B02 151 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 A8MWP6 167 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 C9JAW5 83 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 SOCS3O14543 225 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 YPEL3P61236 119 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-233ENST00000532787 FAM231DQ6ZW35 169 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 HAPLN4Q86UW8 402 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 ANAPC10Q9UM13 185 aa6.2□□□□□ -1.42
CTNND1-233ENST00000532787 RPL15P61313 204 aaKnown RBP6.19□□□□□ -1.42
CTNND1-233ENST00000532787 POU2AF1Q16633 256 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 ZCCHC24Q8N2G6 241 aaKnown RBP6.19□□□□□ -1.42
CTNND1-233ENST00000532787 IGHV3-64A0A075B6Q5 118 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 A0A1W2PRX2 142 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 PSPNO60542 156 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 MST1P26927 711 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 PPDPFLQ8WWR9 84 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 LIME1Q9H400 295 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 SBF2Q86WG5 1849 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 TRAV40A0A0B4J280 105 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 IGHV1-24A0A0C4DH33 117 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 B4DSR2 109 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 HGFACQ04756 655 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 UNC13CQ8NB66 2214 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 PINLYPA6NC86 204 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 SELLP14151 372 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 AZU1P20160 251 aa6.19□□□□□ -1.42
CTNND1-233ENST00000532787 A0A087WV48 116 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 EFNA2O43921 213 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 GAGE1Q13065 139 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 MBD3L4A6NDZ8 208 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-233ENST00000532787 MBD3L3A6NE82 208 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-233ENST00000532787 MBD3L5A6NJ08 208 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-233ENST00000532787 SIVA1O15304 175 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 CLPSP04118 112 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 RBMY1FQ15415 496 aaKnown RBP6.18□□□□□ -1.42
CTNND1-233ENST00000532787 PRIMA1Q86XR5 153 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 MBD3L2Q8NHZ7 208 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-233ENST00000532787 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 CKAP5Q14008 2032 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 LGALS9BQ3B8N2 356 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 LGALS9CQ6DKI2 356 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 LOC285556D6RIA3 1793 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 A0A0U1RRA0 63 aa6.18□□□□□ -1.42
CTNND1-233ENST00000532787 ZNF625Q96I27 306 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms