RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 IGF2BP2-AS1Q96M15 143 aa11.98□□□□□ -0.49
CPSF1-207ENST00000531727 RBM38Q9H0Z9 239 aaKnown RBP11.98□□□□□ -0.49
CPSF1-207ENST00000531727 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
CPSF1-207ENST00000531727 SMCO3A2RU48 225 aa11.97□□□□□ -0.49
CPSF1-207ENST00000531727 NAP1L6A6NFF2 107 aa11.97□□□□□ -0.49
CPSF1-207ENST00000531727 H3BRN7 92 aa11.97□□□□□ -0.49
CPSF1-207ENST00000531727 IL5P05113 134 aa11.97□□□□□ -0.49
CPSF1-207ENST00000531727 INPP1P49441 399 aa11.97□□□□□ -0.49
CPSF1-207ENST00000531727 OXA1LQ15070 435 aa11.97□□□□□ -0.49
CPSF1-207ENST00000531727 SLC25A39Q9BZJ4 359 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-207ENST00000531727 PLA2G2EQ9NZK7 142 aa11.97□□□□□ -0.49
CPSF1-207ENST00000531727 YTHDF2Q9Y5A9 579 aaKnown RBP11.97□□□□□ -0.49
CPSF1-207ENST00000531727 TRAV8-2A0A0B4J237 113 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 SSSCA1O60232 199 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 DUSP14O95147 198 aaKnown RBP11.96□□□□□ -0.49
CPSF1-207ENST00000531727 IFNA21P01568 189 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 CNN1P51911 297 aaKnown RBP11.96□□□□□ -0.49
CPSF1-207ENST00000531727 RAP2BP61225 183 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 BAK1Q16611 211 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 TRIQKQ629K1 86 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 SMIM8Q96KF7 97 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 SHANK2-AS3Q9BTD1 123 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 TMEM208Q9BTX3 173 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 KRTAP17-1Q9BYP8 105 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 FLVCR2Q9UPI3 526 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 FAT2Q9NYQ8 4349 aa11.96□□□□□ -0.49
CPSF1-207ENST00000531727 ZNF701M0R085 212 aaPredicted RBP11.95□□□□□ -0.5
CPSF1-207ENST00000531727 OR4E1P0C645 316 aa11.95□□□□□ -0.5
CPSF1-207ENST00000531727 PLP1P60201 277 aa11.95□□□□□ -0.5
CPSF1-207ENST00000531727 SELENOTP62341 195 aa11.95□□□□□ -0.5
CPSF1-207ENST00000531727 FGL1Q08830 312 aa11.95□□□□□ -0.5
CPSF1-207ENST00000531727 IGFL4Q6B9Z1 124 aa11.95□□□□□ -0.5
CPSF1-207ENST00000531727 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
CPSF1-207ENST00000531727 OR11H7Q8NGC8 314 aa11.95□□□□□ -0.5
CPSF1-207ENST00000531727 M0R2N4 97 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 HYPMO75409 117 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 INSP01308 110 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 LINC00869P0C866 280 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 HTN3P15516 51 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 RPL7P18124 248 aaKnown RBP11.94□□□□□ -0.5
CPSF1-207ENST00000531727 DAD1P61803 113 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 DLK1P80370 383 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 LGALS9BQ3B8N2 356 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 TMEM14EPQ6UXP3 125 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 DNAH17Q9UFH2 4485 aa11.94□□□□□ -0.5
CPSF1-207ENST00000531727 DNAH2Q9P225 4427 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 A0A1B0GVY2 172 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 FNDC10F2Z333 226 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 M0R2Z0 102 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 CRXO43186 299 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-207ENST00000531727 CCNKO75909 580 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 OR5G3P0C626 314 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 RRAS2P62070 204 aaPredicted RBP11.93□□□□□ -0.5
CPSF1-207ENST00000531727 C4orf46Q504U0 113 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 UHRF2Q96PU4 802 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 NPVFQ9HCQ7 196 aa11.93□□□□□ -0.5
CPSF1-207ENST00000531727 A0A087X0K7 114 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 LINC00854A0A1B0GVQ3 168 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 K7EPK0 472 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 RTL8CO15255 209 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 METTL15P1P0C7V9 234 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 ANXA7P20073 488 aaKnown RBP11.92□□□□□ -0.5
CPSF1-207ENST00000531727 BTCP35070 178 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 B2MP61769 119 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 IAH1Q2TAA2 248 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-207ENST00000531727 S100A7AQ86SG5 101 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 SDHCQ99643 169 aaPredicted RBP11.92□□□□□ -0.5
CPSF1-207ENST00000531727 ARL6Q9H0F7 186 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
CPSF1-207ENST00000531727 PRSS29PA6NIE9 313 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 CENPXA8MT69 81 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 ZNF705GA8MUZ8 300 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-207ENST00000531727 BOLA2-SMG1P6H3BVE0 249 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 SCGB1D2O95969 90 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 TAS2R30P59541 319 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 RNF212Q495C1 297 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 TMEM88Q6PEY1 159 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 TEPPQ6URK8 271 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 BAP18Q8IXM2 172 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 ZBTB8BQ8NAP8 495 aaPredicted RBP11.91□□□□□ -0.5
CPSF1-207ENST00000531727 OR10P1Q8NGE3 313 aa11.91□□□□□ -0.5
CPSF1-207ENST00000531727 PKHD1P08F94 4074 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 LYRM9A8MSI8 78 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 TSC22D2O75157 780 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 PRM2P04554 102 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 CXCL3P19876 107 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 TSPOP30536 169 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 HIST1H1AQ02539 215 aaPredicted RBP11.9□□□□□ -0.5
CPSF1-207ENST00000531727 SLC38A11Q08AI6 406 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 PATE2Q6UY27 113 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 OR8A1Q8NGG7 326 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 MITD1Q8WV92 249 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
CPSF1-207ENST00000531727 RCL1Q9Y2P8 373 aaKnown RBP11.9□□□□□ -0.5
CPSF1-207ENST00000531727 IGLV2-18A0A075B6J9 118 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms