RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 OR1B1Q8NGR6 318 aa12.96□□□□□ -0.33
SSSCA1-206ENST00000531405 ATG101Q9BSB4 218 aa12.96□□□□□ -0.33
SSSCA1-206ENST00000531405 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.33
SSSCA1-206ENST00000531405 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 AZU1P20160 251 aa12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 VAMP1P23763 118 aa12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 FGL1Q08830 312 aa12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 BPIFCQ8NFQ6 507 aa12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 SOSTQ9BQB4 213 aa12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 TMEM147Q9BVK8 224 aa12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 SLC25A39Q9BZJ4 359 aaPredicted RBP12.95□□□□□ -0.34
SSSCA1-206ENST00000531405 FABP12A6NFH5 140 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 LYRM9A8MSI8 78 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 H3BP45 60 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 SYNGR2O43760 224 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 MED6O75586 246 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 DUSP14O95147 198 aaKnown RBP12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 PRB4P10163 310 aaPredicted RBP12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 TNFSF8P32971 234 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 AKR1C1Q04828 323 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 TMEM128Q5BJH2 165 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 SPANXN5Q5MJ07 72 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
SSSCA1-206ENST00000531405 PLAC8L1A1L4L8 177 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 F5H768 121 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 NUDT3O95989 172 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 SLC25A6P12236 298 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 FAM3BP58499 235 aaPredicted RBP12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 ACOT7LQ6ZUV0 252 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 LRTM2Q8N967 370 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 ZNF738Q8NE65 137 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 RAB2BQ8WUD1 216 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 GPR82Q96P67 336 aa12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 CIB3Q96Q77 187 aaPredicted RBP12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 APOBP04114 4563 aaKnown RBP12.93□□□□□ -0.34
SSSCA1-206ENST00000531405 PIGBOS1A0A0B4J2F0 54 aa12.92□□□□□ -0.34
SSSCA1-206ENST00000531405 NBDYA0A0U1RRE5 68 aa12.92□□□□□ -0.34
SSSCA1-206ENST00000531405 C16orf90A8MZG2 172 aa12.92□□□□□ -0.34
SSSCA1-206ENST00000531405 HOXB5P09067 269 aa12.92□□□□□ -0.34
SSSCA1-206ENST00000531405 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
SSSCA1-206ENST00000531405 H3BRN7 92 aa12.91□□□□□ -0.34
SSSCA1-206ENST00000531405 BOLA2-SMG1P6H3BVE0 249 aa12.91□□□□□ -0.34
SSSCA1-206ENST00000531405 TSPOP30536 169 aa12.91□□□□□ -0.34
SSSCA1-206ENST00000531405 FAUP35544 74 aaKnown RBP12.91□□□□□ -0.34
SSSCA1-206ENST00000531405 PPP1R1AQ13522 171 aa12.91□□□□□ -0.34
SSSCA1-206ENST00000531405 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
SSSCA1-206ENST00000531405 SMCO3A2RU48 225 aa12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 SFT2D2O95562 160 aa12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 HTN1P15515 57 aa12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 HIST1H1AQ02539 215 aaPredicted RBP12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 CYP2G1PQ6ZSU1 146 aa12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 C6orf223Q8N319 242 aa12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 LINC01587Q99440 93 aa12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 SHANK2-AS3Q9BTD1 123 aa12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
SSSCA1-206ENST00000531405 ATP5G1P05496 136 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 ATP5G3P48201 142 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 TMBIM6P55061 237 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 B2MP61769 119 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 RHOBP62745 196 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 PYDC2Q56P42 97 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 TOMM5Q8N4H5 51 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 MCFD2Q8NI22 146 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 UHRF2Q96PU4 802 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 HIGD1AQ9Y241 93 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 LINC00588Q9Y4M8 146 aa12.89□□□□□ -0.35
SSSCA1-206ENST00000531405 IL5P05113 134 aa12.88□□□□□ -0.35
SSSCA1-206ENST00000531405 S100A7P31151 101 aa12.88□□□□□ -0.35
SSSCA1-206ENST00000531405 RAP2BP61225 183 aa12.88□□□□□ -0.35
SSSCA1-206ENST00000531405 TMEM144Q7Z5S9 345 aa12.88□□□□□ -0.35
SSSCA1-206ENST00000531405 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
SSSCA1-206ENST00000531405 RNF141Q8WVD5 230 aa12.88□□□□□ -0.35
SSSCA1-206ENST00000531405 H3BMQ9 156 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 HYPMO75409 117 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 CCNKO75909 580 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 OR5G3P0C626 314 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 LINC00869P0C866 280 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 RPL7P18124 248 aaKnown RBP12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 CXCL3P19876 107 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 CCL18P55774 89 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 BCL7BQ9BQE9 202 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 PPP1R14DQ9NXH3 145 aa12.87□□□□□ -0.35
SSSCA1-206ENST00000531405 CBY3A6NI87 242 aa12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 ADAP1O75689 374 aa12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 AP3S2P59780 193 aa12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 POLR2GP62487 172 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 PSG3Q16557 428 aa12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 SLC25A21Q9BQT8 299 aaPredicted RBP12.86□□□□□ -0.35
SSSCA1-206ENST00000531405 DNAH5Q8TE73 4624 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 A0A087X0K7 114 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 PMS2P5A8MQ11 134 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 CDK2AP2O75956 126 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 TAS2R60P59551 318 aa12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 RRAS2P62070 204 aaPredicted RBP12.85□□□□□ -0.35
SSSCA1-206ENST00000531405 LRRC20Q8TCA0 184 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms