RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 TRBV7-1A0A0A6YYK4 115 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 TRAV41A0A0B4J266 112 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 RBMY1BA6NDE4 496 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 RBMY1EA6NEQ0 496 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 TOMM40O96008 361 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 RBMY1DP0C7P1 496 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 YPEL3P61236 119 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 C9orf139Q6ZV77 190 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 FNDC1Q4ZHG4 1894 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 NDUFS8O00217 210 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 CNTFRP26992 372 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 ZNF726P1Q15940 193 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 CD7P09564 240 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 IL15RAQ13261 267 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 KLF17Q5JT82 389 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 C18orf32Q8TCD1 76 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 MLNRO43193 412 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 RNASE2P10153 161 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 PLNP26678 52 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 GFRA4Q9GZZ7 299 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 TSC2P49815 1807 aa12.59□□□□□ -0.39
PCDHA4-203ENST00000530339 IGKV2-40A0A087WW87 121 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 IGKV2D-40P01614 121 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 ESDP10768 282 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 HTN3P15516 51 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 CD24P25063 80 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 KLF2Q9Y5W3 355 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 SLC25A16P16260 332 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 ZNF138P52744 262 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 ZNF329Q86UD4 541 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 RNF182Q8N6D2 247 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 WNK2Q9Y3S1 2297 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 LMO1P25800 156 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 CD300EQ496F6 205 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 TRAV2A0A0B4J234 112 aa12.58□□□□□ -0.4
PCDHA4-203ENST00000530339 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 IGLC2P0DOY2 106 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 IGLC3P0DOY3 106 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 DOCK11Q5JSL3 2073 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 TRAV8-1A0A0A6YYK1 113 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 TMEM155Q4W5P6 130 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 Q6ZS92 163 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 LYPD6BQ8NI32 183 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 SELENOKQ9Y6D0 94 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 PI4KAP42356 2102 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 GNLYP22749 145 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 PAX2Q02962 417 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 PDE6HQ13956 83 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 TMEM95Q3KNT9 176 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 LINC00479Q96M42 142 aa12.57□□□□□ -0.4
PCDHA4-203ENST00000530339 TCF20Q9UGU0 1960 aaKnown RBP12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 PSG3Q16557 428 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 C5orf64Q2M2E5 130 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 SSC4DQ8WTU2 575 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 IGKV1D-17A0A075B6S4 117 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 IGHV3-11P01762 117 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 Q6ZWC4 215 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 USMG5Q96IX5 58 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 HEATR5AQ86XA9 2040 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 ERG28Q9UKR5 140 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
PCDHA4-203ENST00000530339 BUB1B-PAK6H3BSN5 160 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 ZC2HC1BQ5TFG8 222 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 SH2D1AO60880 128 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 WDR81Q562E7 1941 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 VMO1Q7Z5L0 202 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 Q86TA4 180 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 FAM223AQ8IWN6 122 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 TRAV8-4A0A0B4J246 113 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 FAM231BA6NCW3 169 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 FXYD7P58549 80 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 SIGLEC9Q9Y336 463 aa12.55□□□□□ -0.4
PCDHA4-203ENST00000530339 MLANAQ16655 118 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 Q8TCH9 128 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 WIPF3A6NGB9 483 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 NPSP0C0P6 89 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 GAGE2BQ13066 116 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 GAGE2EQ4V326 116 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 GAGE2DQ9UEU5 116 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 PLXNA4Q9HCM2 1894 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 PRB4P10163 310 aaPredicted RBP12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 GATA4P43694 442 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 MCRIP2Q9BUT9 160 aaKnown RBP12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 ABCA1O95477 2261 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 GAGE1Q13065 139 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 CYYR1Q96J86 154 aa12.54□□□□□ -0.4
PCDHA4-203ENST00000530339 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 C15orf32Q32M92 178 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms