RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 WDR86Q86TI4 376 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 LHFPL1Q86WI0 220 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 CTAGE3PQ8IX95 158 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 IFT20Q8IY31 132 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 NPBQ8NG41 125 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 OR52R1Q8NGF1 315 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 OR10D4PQ8NGN7 298 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 FAM57AQ8TBR7 257 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 MRPL30Q8TCC3 161 aaKnown RBP3.28□□□□□ -1.88
CD44-220ENST00000525688 ZNF418Q8TF45 676 aaPredicted RBP3.28□□□□□ -1.88
CD44-220ENST00000525688 TMEM106AQ96A25 262 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 PRADC1Q9BSG0 188 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 OR2J1Q9GZK6 312 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 IMUPQ9GZP8 106 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 C11orf68Q9H3H3 251 aaKnown RBP3.28□□□□□ -1.88
CD44-220ENST00000525688 CST9LQ9H4G1 147 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 CA10Q9NS85 328 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 OR5AC2Q9NZP5 309 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 TAC3Q9UHF0 121 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 NUFIP1Q9UHK0 495 aaKnown RBP3.28□□□□□ -1.88
CD44-220ENST00000525688 AK3Q9UIJ7 227 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 NAV2Q8IVL1 2488 aa3.28□□□□□ -1.88
CD44-220ENST00000525688 UBR5O95071 2799 aaPredicted RBP3.28□□□□□ -1.89
CD44-220ENST00000525688 FLNCQ14315 2725 aa3.28□□□□□ -1.89
CD44-220ENST00000525688 TRAV38-1A0A0B4J264 116 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 C9JQL5 133 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 H0YGG7 62 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 COX7A2LO14548 114 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 KLF7O75840 302 aaPredicted RBP3.27□□□□□ -1.89
CD44-220ENST00000525688 LTAP01374 205 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 IFNA17P01571 189 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 UCHL1P09936 223 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 P0DMU3 169 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 FAM231AP0DMU4 169 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 FAM231CP0DMU5 169 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 CA7P43166 264 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 DAPP51397 102 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 DCDP81605 110 aaKnown RBP3.27□□□□□ -1.89
CD44-220ENST00000525688 GLT8D1Q68CQ7 371 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 LYPD2Q6UXB3 125 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 ZNF645Q8N7E2 425 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 SGMS2Q8NHU3 365 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 FNDC9Q8TBE3 224 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 TM2D3Q9BRN9 247 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 WDR61Q9GZS3 305 aaKnown RBP3.27□□□□□ -1.89
CD44-220ENST00000525688 TAF9BQ9HBM6 251 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 PRR34Q9NV39 138 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 ZNF492Q9P255 531 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 PCTPQ9UKL6 214 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 SMAD5-AS1Q9Y6J3 95 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 HEATR5BQ9P2D3 2071 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 PCM1Q15154 2024 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 RELNP78509 3460 aa3.27□□□□□ -1.89
CD44-220ENST00000525688 MYO18BQ8IUG5 2567 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 ANKRD12Q6UB98 2062 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 COL6A6A6NMZ7 2263 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 ASH1LQ9NR48 2969 aaKnown RBP3.26□□□□□ -1.89
CD44-220ENST00000525688 IGLV3-12A0A075B6K2 115 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 LOC102724200A0A096LPH7 203 aaPredicted RBP3.26□□□□□ -1.89
CD44-220ENST00000525688 DHRS12A0PJE2 317 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 DPRXA6NFQ7 191 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 J3QQQ9 107 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 DPM2O94777 84 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 FGF7P21781 194 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 FKBP2P26885 142 aaKnown RBP3.26□□□□□ -1.89
CD44-220ENST00000525688 ZNF83P51522 516 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 ZNF181Q2M3W8 571 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 LYRM7Q5U5X0 104 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 TEX261Q6UWH6 196 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 TIFABQ6ZNK6 161 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 PRR15Q8IV56 129 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 C8orf59Q8N0T1 100 aaPredicted RBP3.26□□□□□ -1.89
CD44-220ENST00000525688 C11orf42Q8N5U0 333 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 ACBD7Q8N6N7 88 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 OR4C16Q8NGL9 310 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 STAG3L4Q8TBR4 150 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 HIST1H2BAQ96A08 127 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 SLAMF6Q96DU3 332 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 C2orf50Q96LR7 162 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 GPX7Q96SL4 187 aaPredicted RBP3.26□□□□□ -1.89
CD44-220ENST00000525688 SPIN2AQ99865 258 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 SPIN2BQ9BPZ2 258 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 SLC25A21Q9BQT8 299 aaPredicted RBP3.26□□□□□ -1.89
CD44-220ENST00000525688 GGTLC1Q9BX51 225 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
CD44-220ENST00000525688 MDC1Q14676 2089 aaKnown RBP3.25□□□□□ -1.89
CD44-220ENST00000525688 TRBV20OR9-2A0A075B6H5 130 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 TRAV9-1A0A075B6T8 112 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 IGHV1-45A0A0A0MS14 117 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 LY6LH3BQJ8 138 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 PGLYRP1O75594 196 aaPredicted RBP3.25□□□□□ -1.89
CD44-220ENST00000525688 IGKV3-15P01624 115 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 NTF3P20783 257 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 TAS2R20P59543 309 aa3.25□□□□□ -1.89
CD44-220ENST00000525688 HBA1P69905 142 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms