RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 OR1L6Q8NGR2 347 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 OR1S1Q8NH92 325 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 MYOZ3Q8TDC0 251 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 USMG5Q96IX5 58 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 OR10C1Q96KK4 312 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 UBE2E2Q96LR5 201 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 RBKSQ9H477 322 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF355PQ9NSJ1 428 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 GSKIPQ9P0R6 139 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 TSSC4Q9Y5U2 329 aaPredicted RBP2.35□□□□□ -2.03
VPS13B-209ENST00000521559 F11RQ9Y624 299 aaKnown RBP2.35□□□□□ -2.03
VPS13B-209ENST00000521559 ALG5Q9Y673 324 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 LRBAP50851 2863 aa2.35□□□□□ -2.03
VPS13B-209ENST00000521559 SONP18583 2426 aaKnown RBP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 IGLV11-55A0A075B6I3 123 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 A0A0G2JLM5 398 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 TEX48A0A1B0GUV7 120 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 RPL37AP8A6NKH3 93 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 FAM223BA6NKX1 122 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 FAM25EA8MYX2 175 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 K7EQG2 157 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 GOSR2O14653 212 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 SYNGR2O43760 224 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 SSNA1O43805 119 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 OR2J3O76001 311 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 SIX6O95475 246 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 HSPB1P04792 205 aaKnown RBP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 REG1AP05451 166 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 SNRPCP09234 159 aaKnown RBP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 LGALS1P09382 135 aaKnown RBP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 RNASE2P10153 161 aaKnown RBP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 SNCAP37840 140 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 MYCNOSP40205 109 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 HTR2BP41595 481 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 MFAP2P55001 183 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 POLR2GP62487 172 aaKnown RBP eCLIP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 HAGHQ16775 308 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 BSXQ3C1V8 233 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 NSUN5P1Q3KNT7 163 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 C2orf83Q53S99 150 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 KIAA2026Q5HYC2 2103 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 SLC25A24Q6NUK1 477 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 REG3GQ6UW15 175 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 FAM159AQ6UWV7 190 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 FAM223AQ8IWN6 122 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 OR4F17Q8NGA8 305 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 OR4D5Q8NGN0 318 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 OR1N2Q8NGR9 330 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 OR1P1Q8NH06 330 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 RNASEH2CQ8TDP1 164 aaKnown RBP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 VN1R17PQ8TDU5 208 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 DTD1Q8TEA8 209 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 C4orf3Q8WVX3 66 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 SMIM8Q96KF7 97 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 CIB3Q96Q77 187 aaPredicted RBP2.34□□□□□ -2.03
VPS13B-209ENST00000521559 OR4F4Q96R69 305 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 P2RX4Q99571 388 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 MED28Q9H204 178 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 TMEM231Q9H6L2 316 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 U3KQ87 197 aa2.34□□□□□ -2.03
VPS13B-209ENST00000521559 TACC2O95359 2948 aa2.34□□□□□ -2.04
VPS13B-209ENST00000521559 MTORP42345 2549 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 CSMD1Q96PZ7 3565 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 WNK2Q9Y3S1 2297 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 TRBV7-1A0A0A6YYK4 115 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3-16A0A0C4DH30 117 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 MFSD2BA6NFX1 497 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 I3L2K1 104 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 I3L521 148 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 K7EIM0 57 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 K7EPK0 472 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 L7N2F9 121 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 CORTO00230 105 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 WRBO00258 174 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 TMEM50AO95807 157 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 MT-CO2P00403 227 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 IFNA10P01566 189 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 IGHV3-11P01762 117 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 RLN2P04090 185 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 IFNA4P05014 189 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 IAPPP10997 89 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 CXCL3P19876 107 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 NPY1RP25929 384 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 GPX4P36969 197 aaPredicted RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 H2BFSP57053 126 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 TAS2R30P59541 319 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 LYZP61626 148 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 RRAS2P62070 204 aaPredicted RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 RAB11AP62491 216 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 EXOSC2Q13868 293 aaKnown RBP2.33□□□□□ -2.04
VPS13B-209ENST00000521559 SPANXN5Q5MJ07 72 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 LEMD1Q68G75 181 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 C19orf35Q6ZS72 473 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 KLHL30-AS1Q8NEE0 82 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 WFDC9Q8NEX5 89 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 OR11H7Q8NGC8 314 aa2.33□□□□□ -2.04
VPS13B-209ENST00000521559 ZNF502Q8TBZ5 544 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms