RNA–Protein interactions for RNA: ENST00000519295.5

AP3B1-204, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP3B1, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-204ENST00000519295 PCBD1P61457 104 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 UNC119Q13432 240 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 KIR3DS1Q14943 382 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 C3orf56Q8N813 242 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 CLDND2Q8NHS1 167 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 FXYD6Q9H0Q3 95 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 NUP214P35658 2090 aaPredicted RBP4.08□□□□□ -1.76
AP3B1-204ENST00000519295 CCL24O00175 119 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 SDCBPO00560 298 aaPredicted RBP4.08□□□□□ -1.76
AP3B1-204ENST00000519295 IFITM1P13164 125 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 MAGEA5P43359 124 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 DPPA3Q6W0C5 159 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 RFLNBQ8N5W9 214 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 FMC1Q96HJ9 113 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 PRELID3AQ96N28 172 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 TMEM191AQ9H0A3 160 aa4.08□□□□□ -1.76
AP3B1-204ENST00000519295 NOP16Q9Y3C1 178 aaKnown RBP4.08□□□□□ -1.76
AP3B1-204ENST00000519295 CELSR2Q9HCU4 2923 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 FBN3Q75N90 2809 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 IRGMA1A4Y4 181 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 KLLNB2CW77 178 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 CREBL2O60519 120 aaPredicted RBP4.07□□□□□ -1.76
AP3B1-204ENST00000519295 CA2P00918 260 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 FRMD6-AS1P0C7T7 363 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 ZNF627Q7L945 461 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 PPP1R1CQ8WVI7 109 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 ATP5SQ99766 215 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 SHANK2-AS3Q9BTD1 123 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 MPDZO75970 2070 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 FSHBP01225 129 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 CCL3P10147 92 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 COX5AP20674 150 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 EMDP50402 254 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 EFNA4P52798 201 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 MIDNQ504T8 468 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 LYPD5Q6UWN5 251 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 SLC35F2Q8IXU6 374 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 AAMDCQ9H7C9 122 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 UTP20O75691 2785 aaKnown RBP4.07□□□□□ -1.76
AP3B1-204ENST00000519295 IGKV3D-15A0A087WSY6 115 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 TRAV26-2A0A0B4J265 109 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 A0A1B0GXF2 115 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 GASTP01350 101 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 ZNF726P1Q15940 193 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 SLC22A24Q8N4F4 322 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 ZNF709Q8N972 641 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 PARP12Q9H0J9 701 aaKnown RBP4.07□□□□□ -1.76
AP3B1-204ENST00000519295 ZNF257Q9Y2Q1 563 aa4.07□□□□□ -1.76
AP3B1-204ENST00000519295 SPTAN1Q13813 2472 aaKnown RBP4.07□□□□□ -1.76
AP3B1-204ENST00000519295 NOTCH2Q04721 2471 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 SOX14O95416 240 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 CYB5AP00167 134 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 PFN2P35080 140 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 RPS11P62280 158 aaKnown RBP eCLIP4.06□□□□□ -1.76
AP3B1-204ENST00000519295 SPHARQ15513 63 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 SYT14P1Q58G82 188 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 C1orf140Q5VVS0 124 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 IGHV3-7P01780 117 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 AKAIN1P0CW23 69 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 TPT1P13693 172 aaKnown RBP4.06□□□□□ -1.76
AP3B1-204ENST00000519295 MBD3L1Q8WWY6 194 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 PGLYRP3Q96LB9 341 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 LYSTQ99698 3801 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 NAP1L6A6NFF2 107 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 NDUFB2O95178 105 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 HMGA2P52926 109 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 LOXL3P58215 753 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 DSCR9P59020 149 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 ZNF493Q6ZR52 646 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 ZNF439Q8NDP4 499 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 OR10AG1Q8NH19 301 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 DLX4Q92988 240 aaPredicted RBP4.06□□□□□ -1.76
AP3B1-204ENST00000519295 NMES1Q9C002 83 aa4.06□□□□□ -1.76
AP3B1-204ENST00000519295 IL3RAP26951 378 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 DEFB121Q5J5C9 76 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 C16orf47Q6ZP98 133 aaPredicted RBP4.05□□□□□ -1.76
AP3B1-204ENST00000519295 HMGN2P46Q86SG4 172 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 OR10G2Q8NGC3 310 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 PRRC2CQ9Y520 2896 aaKnown RBP4.05□□□□□ -1.76
AP3B1-204ENST00000519295 A0A1B0GTL3 188 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 IGHA1P01876 353 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 CTXN1P60606 82 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 ETDBQ3ZM63 59 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 TRAPPC6BQ86SZ2 158 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 C15orf40Q8WUR7 153 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 DNAJA3Q96EY1 480 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 ZNF503Q96F45 646 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 PTPN13Q12923 2485 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 USP9XQ93008 2570 aaPredicted RBP4.05□□□□□ -1.76
AP3B1-204ENST00000519295 A0A1B0GWA3 101 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 A1L4Q6 167 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 M0R129 80 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 MPV17P39210 176 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 C12orf74Q32Q52 190 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 RPL7L1Q6DKI1 246 aaKnown RBP4.05□□□□□ -1.76
AP3B1-204ENST00000519295 GTF2H5Q6ZYL4 71 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 C5orf38Q86SI9 138 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 TMEM52Q8NDY8 209 aa4.05□□□□□ -1.76
AP3B1-204ENST00000519295 GNPNAT1Q96EK6 184 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms