RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TIMM17BO60830 172 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 IFNA17P01571 189 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 HBDP02042 147 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 TRGC1P0CF51 173 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 CRYGAP11844 174 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 HLA-DRB4P13762 266 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF93P35789 620 aaPredicted RBP2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 AQP4P55087 323 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 PKIAP61925 76 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 FOXF1Q12946 379 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 LINC00483Q53H64 154 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF880Q6PDB4 577 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 PATE2Q6UY27 113 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 Q6ZR54 194 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 GTF2H5Q6ZYL4 71 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 C3orf56Q8N813 242 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 AQP3Q92482 292 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 MCEEQ96PE7 176 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 CIB3Q96Q77 187 aaPredicted RBP2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 OR4C12Q96R67 309 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 SDF2Q99470 211 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 HLA-DRB4X5D2U9 266 aa2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 COL1A1P02452 1464 aaPredicted RBP2.5□□□□□ -2.01
RNU4-60P-201ENST00000517239 CABIN1Q9Y6J0 2220 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 NISCHQ9Y2I1 1504 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 DCAF1Q9Y4B6 1507 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 ANKRD26Q9UPS8 1709 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 A0A0D9SG52 128 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 PVALEFA0A1B0GWK0 134 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 TMEM218A2RU14 115 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 C7orf66A4D0T2 115 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 C11orf86A6NJI1 115 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 H3BPC8 53 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 K7EM74 188 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 CDC42EP2O14613 210 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF705BP0CI00 300 aaPredicted RBP2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZNF22P17026 224 aaPredicted RBP2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 CD24P25063 80 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 FOXA1P55317 472 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 RELAQ04206 551 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 EBI3Q14213 229 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 CDK5R1Q15078 307 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 FAM27BQ5VT28 67 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 ACBD7Q8N6N7 88 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 FAM216BQ8N7L0 139 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 DIRC1Q969H9 104 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 BCL2L10Q9HD36 194 aa2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZFC3H1O60293 1989 aaKnown RBP2.49□□□□□ -2.01
RNU4-60P-201ENST00000517239 SHANK3Q9BYB0 1731 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 ZFYVE16Q7Z3T8 1539 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 QRICH2Q9H0J4 1663 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 ABCC10Q5T3U5 1492 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 PHIPQ8WWQ0 1821 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 IGLV3-9A0A075B6K5 115 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 TRGV5A0A0B4J1U4 118 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 FNDC10F2Z333 226 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 CCL25O15444 150 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 SHBGP04278 402 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 TPT1P13693 172 aaKnown RBP2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 FABP4P15090 132 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 HIST1H1BP16401 226 aaKnown RBP2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 TPPP2P59282 170 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 LSM3P62310 102 aaKnown RBP2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 CLLU1Q5K131 121 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 NCMAPQ5T1S8 102 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 TMEM91Q6ZNR0 172 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 SLC35E3Q7Z769 313 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 TEN1Q86WV5 123 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 DYNAPQ8N1N2 210 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 LINC00311Q8N616 119 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 Q8NDZ9 215 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 KLF14Q8TD94 323 aaPredicted RBP2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 MRPS24Q96EL2 167 aaKnown RBP2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 RERGLQ9H628 205 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 FKBP11Q9NYL4 201 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 TP53BP1Q12888 1972 aaPredicted RBP2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 RGS12O14924 1447 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 POLEQ07864 2286 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 NRKQ7Z2Y5 1582 aa2.48□□□□□ -2.01
RNU4-60P-201ENST00000517239 KIDINS220Q9ULH0 1771 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 MYO10Q9HD67 2058 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 TRAV30A0A087WSZ9 112 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 IFITM5A6NNB3 132 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 H7C2G1 150 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 GNRH2O43555 120 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 PYYP10082 97 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 COX6A1P12074 109 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 FUSP35637 526 aaKnown RBP eCLIP2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 TMEM258P61165 79 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 PCBD1P61457 104 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 CDK6Q00534 326 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 LYZL1Q6UWQ5 148 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 Q6ZS52 159 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 AAED1Q7RTV5 226 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 Q8NAQ8 132 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms