RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 LY96Q9Y6Y9 160 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CCDC88CQ9P219 2028 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 RGS12O14924 1447 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 IGKV2D-26A0A0A0MRZ7 120 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TRAV12-1A0A0B4J245 112 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TRBV6-5A0A0K0K1A5 114 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 J3KT08 172 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 KPNA4O00629 521 aaPredicted RBP1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 DEGS1O15121 323 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR1I1O60431 355 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 MT-ND6P03923 174 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR10J4P0C629 311 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ARPC4P59998 168 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 RAB4BP61018 213 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR8B8Q15620 311 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 PCOTHQ58A44 107 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 LINC00305Q7Z4B0 112 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TMEM229BQ8NBD8 167 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 SFT2D1Q8WV19 159 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 MAFIPQ8WZ33 124 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TCEAL2Q9H3H9 227 aaPredicted RBP1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 JPT1Q9UK76 154 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 VWDEQ8N2E2 1590 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CACNA1GO43497 2377 aa1.41□□□□□ -2.18
SCARNA15.2-201ENST00000516409 FHAD1B1AJZ9 1412 aa1.4□□□□□ -2.18
SCARNA15.2-201ENST00000516409 PLXNA3P51805 1871 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 NUP210LQ5VU65 1888 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 STRCQ7RTU9 1775 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 ARHGEF10O15013 1369 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 IGHV1-58A0A0C4DH39 117 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 M0R233 179 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 DHFRP00374 187 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 IGLV1-51P01701 117 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 BRS3P32247 399 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 NDUFA6P56556 154 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 RPS28P62857 69 aaKnown RBP1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 PDE6HQ13956 83 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 C1orf134Q5TEV5 83 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 C4orf22Q6V702 233 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 KRTAP13-1Q8IUC0 172 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 C15orf53Q8NAA6 179 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 LXNQ9BS40 222 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 NIT2Q9NQR4 276 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 OR5AC2Q9NZP5 309 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 GSKIPQ9P0R6 139 aa1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 FN1P02751 2386 aaKnown RBP1.4□□□□□ -2.19
SCARNA15.2-201ENST00000516409 MDC1Q14676 2089 aaKnown RBP1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 MICAL3Q7RTP6 2002 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TRGV2A0A075B6R0 118 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TRAV36DV7A0A075B6V5 113 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 LOC107984640A0A0U1RRK4 108 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 OR2T8A6NH00 312 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 SDC4P31431 198 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 RAB5CP51148 216 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 CDK5R1Q15078 307 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 VMA21Q3ZAQ7 101 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 FAM216BQ8N7L0 139 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 Q8N814 137 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 OR5D14Q8NGL3 314 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 OR5H6Q8NGV6 325 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TMEM254Q8TBM7 123 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 RAB37Q96AX2 223 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 REG4Q9BYZ8 158 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 SPANXA1Q9NS26 97 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 CBLN4Q9NTU7 201 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 RP1P56715 2156 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 EML6Q6ZMW3 1958 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TRAPPC8Q9Y2L5 1435 aa1.39□□□□□ -2.19
SCARNA15.2-201ENST00000516409 BAZ2BQ9UIF8 2168 aaKnown RBP1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 NUP98P52948 1817 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 ZCCHC11Q5TAX3 1644 aaKnown RBP1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 SBF1O95248 1867 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 GBF1Q92538 1859 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 MYO5AQ9Y4I1 1855 aaKnown RBP1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TRAV13-1A0A0B4J241 112 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TCRBV4S1A1TA0A5B7 111 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 PCNX2A6NKB5 2137 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 C17orf112F2Z3M2 114 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 H3BMG7 143 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 M0QZK8 103 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 CD2P06729 351 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 CMPK1P30085 196 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 CDK6Q00534 326 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 C10orf55Q5SWW7 151 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 RPS19BP1Q86WX3 136 aaKnown RBP1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 BRK1Q8WUW1 75 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 LZICQ8WZA0 190 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 HYLS1Q96M11 299 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 GGACTQ9BVM4 153 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 RASL12Q9NYN1 266 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 ARHGEF11O15085 1522 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 BAHCC1Q9P281 2608 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 STRCP1A6NGW2 1772 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 N4BP2Q86UW6 1770 aaPredicted RBP1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TAF1LQ8IZX4 1826 aa1.38□□□□□ -2.19
SCARNA15.2-201ENST00000516409 RTL9Q8NET4 1388 aa1.37□□□□□ -2.19
SCARNA15.2-201ENST00000516409 UBR2Q8IWV8 1755 aa1.37□□□□□ -2.19
SCARNA15.2-201ENST00000516409 DOCK10Q96BY6 2186 aa1.37□□□□□ -2.19
SCARNA15.2-201ENST00000516409 TRBV27A0A0K0K1C4 114 aa1.37□□□□□ -2.19
SCARNA15.2-201ENST00000516409 A0A1B0GW64 132 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms