RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TIMM23O14925 209 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 DOCK11Q5JSL3 2073 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 ADARB2-AS1A8MUL3 147 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 HTN3P15516 51 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 C9orf106Q8NAJ2 232 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 JPT2Q9H910 190 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 PSPNO60542 156 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 SH2D1AO60880 128 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 RPL15P61313 204 aaKnown RBP10.9□□□□□ -0.66
TCOF1-214ENST00000515035 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 C5orf24Q7Z6I8 188 aa10.9□□□□□ -0.66
TCOF1-214ENST00000515035 SMKR1H3BMG3 65 aa10.9□□□□□ -0.67
TCOF1-214ENST00000515035 RNF144BQ7Z419 303 aa10.9□□□□□ -0.67
TCOF1-214ENST00000515035 C18orf32Q8TCD1 76 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 WFDC12Q8WWY7 111 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 CHCHD5Q9BSY4 110 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 A0A1B0GWJ7 208 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 QRFPP83859 136 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 ZCCHC24Q8N2G6 241 aaKnown RBP10.89□□□□□ -0.67
TCOF1-214ENST00000515035 Q8TAT8 98 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 TRGV9Q99603 122 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 A0A0G2JRQ6 117 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 C15orf62A8K5M9 175 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 MLNRO43193 412 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 IGHV2-5P01817 119 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 SIGLEC15Q6ZMC9 328 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 RNASE6Q93091 150 aaKnown RBP10.89□□□□□ -0.67
TCOF1-214ENST00000515035 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 LAMTOR3Q9UHA4 124 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 MTCL1Q9Y4B5 1905 aaKnown RBP10.89□□□□□ -0.67
TCOF1-214ENST00000515035 LILRA1O75019 489 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 GAGE2AQ6NT46 116 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 TEX43Q6ZNM6 134 aa10.89□□□□□ -0.67
TCOF1-214ENST00000515035 NABP1Q96AH0 204 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 ZNF625Q96I27 306 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-214ENST00000515035 VCYO14598 125 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 PAX8Q06710 450 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 MBNL3Q9NUK0 354 aaKnown RBP10.88□□□□□ -0.67
TCOF1-214ENST00000515035 K7EP13 123 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 TRGV4A0A0C4DH28 118 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 C9orf118A6NHY6 69 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 SELLP14151 372 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 ZNF474Q6S9Z5 364 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-214ENST00000515035 Q6ZRM9 215 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 LINC00479Q96M42 142 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 GREB1Q4ZG55 1949 aa10.88□□□□□ -0.67
TCOF1-214ENST00000515035 SRRM5B3KS81 715 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 GAGE1Q13065 139 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 FLVCR1-AS1Q8TAF5 88 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-214ENST00000515035 PEMTQ9UBM1 199 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 DOCK4Q8N1I0 1966 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 EFNA2O43921 213 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 STHQ8IWL8 128 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 CSTL1Q9H114 145 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 NCOR1P1Q9H4R4 102 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 RIF1Q5UIP0 2472 aaKnown RBP10.87□□□□□ -0.67
TCOF1-214ENST00000515035 TRAV40A0A0B4J280 105 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 LINC00473A8K010 186 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 SLAQ13239 276 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 Q6ZWC4 215 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 TNFRSF14Q92956 283 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 C7orf69Q9H7B7 122 aa10.87□□□□□ -0.67
TCOF1-214ENST00000515035 SRD5A1P18405 259 aa10.86□□□□□ -0.67
TCOF1-214ENST00000515035 C14orf178Q8N769 122 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-214ENST00000515035 GBF1Q92538 1859 aa10.86□□□□□ -0.67
TCOF1-214ENST00000515035 C5orf63A6NC05 138 aa10.86□□□□□ -0.67
TCOF1-214ENST00000515035 C17orf82Q86X59 251 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-214ENST00000515035 RASL10AQ92737 203 aa10.86□□□□□ -0.67
TCOF1-214ENST00000515035 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
TCOF1-214ENST00000515035 ARFGEF3Q5TH69 2177 aa10.86□□□□□ -0.67
TCOF1-214ENST00000515035 FOXG1P55316 489 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-214ENST00000515035 ARMS2P0C7Q2 107 aa10.86□□□□□ -0.67
TCOF1-214ENST00000515035 SRRM4A7MD48 611 aaKnown RBP10.85□□□□□ -0.67
TCOF1-214ENST00000515035 COLCA1Q6ZS62 124 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 PPDPFLQ8WWR9 84 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 E9PLN8 166 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 C15orf32Q32M92 178 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 Q86TA4 180 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 ZNF329Q86UD4 541 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 ZNF581Q9P0T4 197 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 TRBV6-6A0A0A6YYG2 114 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 VWC2LB2RUY7 222 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 OVOL2Q9BRP0 275 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 GFRA4Q9GZZ7 299 aa10.85□□□□□ -0.67
TCOF1-214ENST00000515035 IGHV1-18A0A0C4DH31 117 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 TIMM21Q9BVV7 248 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 CACNA1HO95180 2353 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 MYMXA0A1B0GTQ4 84 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 IGLL1P15814 213 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 TRBV20-1A0A075B6N2 111 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 H3BMM0 161 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 K7EP34 96 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 FAM168AQ92567 244 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 UBE2WQ96B02 151 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
TCOF1-214ENST00000515035 ANK1P16157 1881 aa10.84□□□□□ -0.67
TCOF1-214ENST00000515035 IGHV3-73A0A0B4J1V6 119 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms