RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 INSIG2Q9Y5U4 225 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 SPCS1Q9Y6A9 102 aa6.99□□□□□ -1.29
LIMCH1-209ENST00000509277 FN1P02751 2386 aaKnown RBP6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 NCBP2LA6PVI3 153 aaKnown RBP6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 LEPROTL1O95214 131 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 TYMSP04818 313 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 RAB9AP51151 201 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 CATR1Q13166 79 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 HSD17B10Q99714 261 aaKnown RBP6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 A0A1B0GV72 72 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 MSMBP08118 114 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 IBA57Q5T440 356 aaKnown RBP6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 OR10W1Q8NGF6 305 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 PYGO2Q9BRQ0 406 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 YAE1D1Q9NRH1 226 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 IL36BQ9NZH7 164 aa6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 PEF1Q9UBV8 284 aaKnown RBP6.98□□□□□ -1.29
LIMCH1-209ENST00000509277 LINC00473A8K010 186 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 J3QR06 171 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 K7EP13 123 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 LOXL3P58215 753 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 SLAQ13239 276 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 EBLN2Q6P2I7 272 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 WDR73Q6P4I2 378 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 OR9G1Q8NH87 305 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 BLNKQ8WV28 456 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 TNFRSF14Q92956 283 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 ASCL2Q99929 193 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 TAX1BP3O14907 124 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 PDE6DO43924 150 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 IGKV1-5P01602 117 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 CKS1BP61024 79 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 ZNF645Q8N7E2 425 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 STXBP6Q8NFX7 210 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 AGMATQ9BSE5 352 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 TSSC4Q9Y5U2 329 aaPredicted RBP6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 MAST4O15021 2626 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 IGLC7A0M8Q6 106 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 PPIFP30405 207 aaKnown RBP6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 PAX2Q02962 417 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 C12orf54Q6X4T0 127 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 C1orf229Q6ZS94 237 aaPredicted RBP6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM70Q9BUB7 260 aa6.97□□□□□ -1.29
LIMCH1-209ENST00000509277 FAM181BA6NEQ2 426 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 B4DSR2 109 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 IGHV4-38-2P0DP08 117 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 CD1BP29016 333 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM177Q53S58 311 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 TMEM219Q86XT9 240 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 TEX45Q8NA69 505 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 IFI27L2Q9H2X8 130 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 SS18L2Q9UHA2 77 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 CDC42EP3Q9UKI2 254 aa6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 YTHDF2Q9Y5A9 579 aaKnown RBP6.96□□□□□ -1.29
LIMCH1-209ENST00000509277 SERTM2A0A1B0GWG4 89 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 ERVK-16P61578 105 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 TCF24Q7RTU0 167 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 Q8N7P7 452 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 OR2K2Q8NGT1 345 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 OR10AG1Q8NH19 301 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 OR4S2Q8NH73 311 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 TRBV6-6A0A0A6YYG2 114 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 YPEL1O60688 119 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 MYOD1P15172 320 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 SLC25A16P16260 332 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 C5orf30Q96GV9 206 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 HARBI1Q96MB7 349 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 YPEL2Q96QA6 119 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 BEX4Q9NWD9 120 aaPredicted RBP6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 TMEM56-RWDD3S4R434 201 aa6.96□□□□□ -1.3
LIMCH1-209ENST00000509277 TMSB15BA0A087X1C1 80 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 TRAV1-1A0A0B4J248 108 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 TEX48A0A1B0GUV7 120 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 H0Y980 276 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 K7EN84 100 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 IGKV1-16P04430 117 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 GPR183P32249 361 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 SAA4P35542 130 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 BVES-AS1Q5T3Y7 98 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 LRTM2Q8N967 370 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 OR4A16Q8NH70 328 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 TMEM191AQ9H0A3 160 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 LIN7CQ9NUP9 197 aaKnown RBP6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 ANAPC10Q9UM13 185 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 NPIPB11E5RHQ5 1161 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 F2RL2O00254 374 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 TNFRSF13BO14836 293 aaPredicted RBP6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 TIMM23O14925 209 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 SLC25A17O43808 307 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 VENTXO95231 258 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 PPBPP02775 128 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 ESDP10768 282 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 AMTNQ6UX39 209 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 PSMG3Q9BT73 122 aaPredicted RBP6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 ENY2Q9NPA8 101 aa6.95□□□□□ -1.3
LIMCH1-209ENST00000509277 AVPP01185 164 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms