RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 MED11Q9P086 117 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 PRNDQ9UKY0 176 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 RIMBP3CA6NJZ7 1639 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 RIMBP3BA6NNM3 1639 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 RIMBP3Q9UFD9 1639 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 MYH10P35580 1976 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 MYOFQ9NZM1 2061 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 RP1P56715 2156 aa0.55□□□□□ -2.32
UBE2D3-218ENST00000505009 PBRM1Q86U86 1689 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TRAV12-1A0A0B4J245 112 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 CCDC160A6NGH7 325 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 C2orf70A6NJV1 201 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 PPP5D1E7EU14 171 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TMEM256-PLSCR3K7ERE1 68 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 M0R233 179 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 M0R378 163 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 LYRM1O43325 122 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 DHFRP00374 187 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 CSN2P05814 226 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 OR10J4P0C629 311 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 HLA-EP13747 358 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 ZNF93P35789 620 aaPredicted RBP0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 DYNLT3P51808 116 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 B2MP61769 119 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 PDE6HQ13956 83 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 DEFB113Q30KQ7 82 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TEX261Q6UWH6 196 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 C4orf22Q6V702 233 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 SOSTDC1Q6X4U4 206 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TEN1Q86WV5 123 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 PDZD9Q8IXQ8 264 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 CLECL1Q8IZS7 167 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 DYDC1Q8WWB3 177 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TEX37Q96LM6 180 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TP53RKQ96S44 253 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 LYSMD1Q96S90 227 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 PRRT1Q99946 306 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 BOLA2Q9H3K6 86 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TAF9BQ9HBM6 251 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 POPDC3Q9HBV1 291 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 ATPIF1Q9UII2 106 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 OR52A1Q9UKL2 312 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 PCTPQ9UKL6 214 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 U3KQ87 197 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 NUP210LQ5VU65 1888 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 TNS3Q68CZ2 1445 aa0.54□□□□□ -2.32
UBE2D3-218ENST00000505009 SYNMO15061 1565 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 FRMPD1Q5SYB0 1578 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 ALPK2Q86TB3 2170 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 PIK3C2AO00443 1686 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TRBV6-7A0A0A0MS04 114 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TRBV6-8A0A0A6YYG3 113 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TRAV5A0A0B4J249 113 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TCRBV4S1A1TA0A5B7 111 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TLCD2A6NGC4 264 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 OR2T8A6NH00 312 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 E7EQ34 232 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 H3BQV1 296 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 GPR31O00270 319 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 HIST1H2BKO60814 126 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 LYZL6O75951 148 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 CST7O76096 145 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TRGC2P03986 189 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 HIST1H2BJP06899 126 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 RNASE3P12724 160 aaKnown RBP0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 IDO1P14902 403 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 RAB5CP51148 216 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TMBIM6P55061 237 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 NDUFA6P56556 154 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 CDK6Q00534 326 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 RTL8BQ17RB0 113 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 C1orf137Q5JT78 98 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 DCUN1D2Q6PH85 259 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 SMIM15Q7Z3B0 74 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 Q8N814 137 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 NUP35Q8NFH5 326 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 OR10K1Q8NGX5 313 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 BORCS5Q969J3 196 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 ISOC1Q96CN7 298 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 MUCL1Q96DR8 90 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 CCDC32Q9BV29 185 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 RTL8AQ9BWD3 113 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 TMEM126AQ9H061 195 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 PCBD2Q9H0N5 130 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 UFC1Q9Y3C8 167 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 MYH3P11055 1940 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 MYH2Q9UKX2 1941 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 EML6Q6ZMW3 1958 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 SCN8AQ9UQD0 1980 aa0.53□□□□□ -2.32
UBE2D3-218ENST00000505009 CACNA1BQ00975 2339 aa0.53□□□□□ -2.33
UBE2D3-218ENST00000505009 NUP98P52948 1817 aa0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 MYLKQ15746 1914 aa0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 DOCK4Q8N1I0 1966 aa0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 IGLV3-32A0A0A0MS00 114 aa0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 TRAV10A0A0B4J240 114 aa0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 MAP1LC3B2A6NCE7 125 aa0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 ZNF736B4DX44 427 aaPredicted RBP0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 C5orf58C9J3I9 102 aa0.52□□□□□ -2.33
UBE2D3-218ENST00000505009 H3BRM9 83 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms