RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 LINC00052Q96N35 136 aa10.4□□□□□ -0.74
CLDN11-207ENST00000486975 XCL2Q9UBD3 114 aa10.4□□□□□ -0.74
CLDN11-207ENST00000486975 A0A0J9YX75 114 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 A8MTW9 85 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 ZNF705FA8MVS1 300 aaPredicted RBP10.39□□□□□ -0.75
CLDN11-207ENST00000486975 ZNF705DP0CH99 300 aaPredicted RBP10.39□□□□□ -0.75
CLDN11-207ENST00000486975 ZNF705BP0CI00 300 aaPredicted RBP10.39□□□□□ -0.75
CLDN11-207ENST00000486975 ORM2P19652 201 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 GATA2P23769 480 aaPredicted RBP10.39□□□□□ -0.75
CLDN11-207ENST00000486975 HLA-DMBP28068 263 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 ZNF709Q8N972 641 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 C17orf77Q96MU5 243 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 CCDC32Q9BV29 185 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 RPRMQ9NS64 109 aa10.39□□□□□ -0.75
CLDN11-207ENST00000486975 RCL1Q9Y2P8 373 aaKnown RBP10.39□□□□□ -0.75
CLDN11-207ENST00000486975 SMCO3A2RU48 225 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 H3BRN7 92 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 EREGO14944 169 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 PAX4O43316 350 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 TCRBP04435 133 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 IL5P05113 134 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 METTL15P1P0C7V9 234 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 DEFB1P60022 68 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 EBLN2Q6P2I7 272 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 OR10P1Q8NGE3 313 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 C16orf92Q96LL3 132 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 SHANK2-AS3Q9BTD1 123 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 RSG1Q9BU20 258 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 GGACTQ9BVM4 153 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 SLC25A39Q9BZJ4 359 aaPredicted RBP10.38□□□□□ -0.75
CLDN11-207ENST00000486975 SLC25A22Q9H936 323 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 NPVFQ9HCQ7 196 aa10.38□□□□□ -0.75
CLDN11-207ENST00000486975 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 SMIM9A6NGZ8 99 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 CCNKO75909 580 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 SCGB1D2O95969 90 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 MBPP02686 304 aaPredicted RBP10.37□□□□□ -0.75
CLDN11-207ENST00000486975 LINC00869P0C866 280 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 RAP2BP61225 183 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 Q6ZTC4 211 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 S100A7AQ86SG5 101 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 SCRT1Q9BWW7 348 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 BIRC6Q9NR09 4857 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 GSKIPQ9P0R6 139 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 MGAT4CQ9UBM8 478 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 HIGD1AQ9Y241 93 aa10.37□□□□□ -0.75
CLDN11-207ENST00000486975 C7orf66A4D0T2 115 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 TMEM189A5PLL7 270 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 HYPMO75409 117 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 RPL7P18124 248 aaKnown RBP10.36□□□□□ -0.75
CLDN11-207ENST00000486975 PSG9Q00887 426 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 ZNF846Q147U1 533 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 PXDC1Q5TGL8 231 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 FAM78BQ5VT40 261 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 TEPPQ6URK8 271 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 OR4B1Q8NGF8 309 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 ZNF431Q8TF32 576 aaPredicted RBP10.36□□□□□ -0.75
CLDN11-207ENST00000486975 NUDT15Q9NV35 164 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 DOK5Q9P104 306 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 APLNQ9ULZ1 77 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 RNF24Q9Y225 148 aa10.36□□□□□ -0.75
CLDN11-207ENST00000486975 F6UB75 175 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 DEDDO75618 318 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 RRAS2P62070 204 aaPredicted RBP10.35□□□□□ -0.75
CLDN11-207ENST00000486975 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 AMTNQ6UX39 209 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 ZNF546Q86UE3 836 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 C20orf173Q96LM9 149 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 SLC35B3Q9H1N7 401 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 CELA1Q9UNI1 258 aa10.35□□□□□ -0.75
CLDN11-207ENST00000486975 TRAV6A0A075B6T7 132 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 A0A087X0K7 114 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 TRAV8-2A0A0B4J237 113 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 TEX48A0A1B0GUV7 120 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 IGLL5B9A064 214 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 AMBPP02760 352 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 RNF126Q9BV68 326 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 GOLT1BQ9Y3E0 138 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
CLDN11-207ENST00000486975 CCSO14618 274 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 DUSP14O95147 198 aaKnown RBP10.33□□□□□ -0.76
CLDN11-207ENST00000486975 OR5G3P0C626 314 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 SPART-AS1P0CW21 52 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 FXYD7P58549 80 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 SLC38A11Q08AI6 406 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 GSG1LQ6UXU4 331 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 C12orf45Q8N5I9 185 aaPredicted RBP10.33□□□□□ -0.76
CLDN11-207ENST00000486975 RPP25LQ8N5L8 163 aaKnown RBP10.33□□□□□ -0.76
CLDN11-207ENST00000486975 S100ZQ8WXG8 99 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 SEC22CQ9BRL7 303 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 ARV1Q9H2C2 271 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 C11orf1Q9H5F2 150 aa10.33□□□□□ -0.76
CLDN11-207ENST00000486975 L7N2F9 121 aa10.32□□□□□ -0.76
CLDN11-207ENST00000486975 GOSR2O14653 212 aa10.32□□□□□ -0.76
CLDN11-207ENST00000486975 MRPS12O15235 138 aaKnown RBP10.32□□□□□ -0.76
CLDN11-207ENST00000486975 VAMP2P63027 116 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms