RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SLC25A39Q9BZJ4 359 aaPredicted RBP11.11□□□□□ -0.63
DDX56-210ENST00000479440 HSPB7Q9UBY9 170 aa11.11□□□□□ -0.63
DDX56-210ENST00000479440 MTFP1Q9UDX5 166 aa11.11□□□□□ -0.63
DDX56-210ENST00000479440 FAT1Q14517 4588 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 ZNF98A6NK75 572 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 FAM25AB3EWG3 89 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 FAM25CB3EWG5 89 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 FAM25GB3EWG6 89 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 HPGDSO60760 199 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 RAB3DO95716 219 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 IFNA5P01569 189 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 CCR6P51684 374 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 RHOBP62745 196 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 GGNBP1Q5YKI7 109 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 Q6ZRN7 208 aaPredicted RBP11.1□□□□□ -0.63
DDX56-210ENST00000479440 TMEM229BQ8NBD8 167 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 OR52I2Q8NH67 350 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 RNASE8Q8TDE3 154 aaKnown RBP11.1□□□□□ -0.63
DDX56-210ENST00000479440 IL22RA2Q969J5 263 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 RBKSQ9H477 322 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 TMEM56-RWDD3S4R434 201 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 MYCBP2O75592 4640 aa11.1□□□□□ -0.63
DDX56-210ENST00000479440 CRYM-AS1A6NIL9 109 aa11.09□□□□□ -0.63
DDX56-210ENST00000479440 ZNF701M0R085 212 aaPredicted RBP11.09□□□□□ -0.63
DDX56-210ENST00000479440 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
DDX56-210ENST00000479440 SMCO1Q147U7 214 aa11.09□□□□□ -0.63
DDX56-210ENST00000479440 SURF2Q15527 256 aaPredicted RBP11.09□□□□□ -0.63
DDX56-210ENST00000479440 STEAP1BQ6NZ63 245 aa11.09□□□□□ -0.63
DDX56-210ENST00000479440 RNF182Q8N6D2 247 aa11.09□□□□□ -0.63
DDX56-210ENST00000479440 TMEM147Q9BVK8 224 aa11.09□□□□□ -0.63
DDX56-210ENST00000479440 J3QL48 77 aa11.08□□□□□ -0.64
DDX56-210ENST00000479440 RAB11AP62491 216 aa11.08□□□□□ -0.64
DDX56-210ENST00000479440 FGL1Q08830 312 aa11.08□□□□□ -0.64
DDX56-210ENST00000479440 ICAM4Q14773 271 aa11.08□□□□□ -0.64
DDX56-210ENST00000479440 THAP8Q8NA92 274 aa11.08□□□□□ -0.64
DDX56-210ENST00000479440 C17orf77Q96MU5 243 aa11.08□□□□□ -0.64
DDX56-210ENST00000479440 RTBDNQ9BSG5 229 aaPredicted RBP11.08□□□□□ -0.64
DDX56-210ENST00000479440 VPS13BQ7Z7G8 4022 aa11.08□□□□□ -0.64
DDX56-210ENST00000479440 TRAV8-2A0A0B4J237 113 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 H7BYZ3 331 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 RLN2P04090 185 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 CDKN1BP46527 198 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 MZT2AQ6P582 158 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 LINC00612Q8N6U2 182 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 BPIFCQ8NFQ6 507 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 OR8A1Q8NGG7 326 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 C15orf40Q8WUR7 153 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 YIPF6Q96EC8 236 aa11.07□□□□□ -0.64
DDX56-210ENST00000479440 IGKV1OR2-108A0A075B7D4 117 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 ORM2P19652 201 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 HOXA5P20719 270 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 FUSP35637 526 aaKnown RBP eCLIP11.06□□□□□ -0.64
DDX56-210ENST00000479440 Q6ZSN1 163 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 CCDC28AQ8IWP9 274 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 VCX3AQ9NNX9 186 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 KCNIP3Q9Y2W7 256 aa11.06□□□□□ -0.64
DDX56-210ENST00000479440 A0A0B4J2A0 478 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 SNURFLB1AK76 121 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 DISC1C4P0D8 188 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 SIVA1O15304 175 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 GAGE7O76087 117 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 GAGE12FP0CL80 117 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 GAGE12GP0CL81 117 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 GAGE12IP0CL82 117 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 AKR1C4P17516 323 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 FAAP20Q6NZ36 180 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 NFE4Q86UQ8 179 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 OR1S1Q8NH92 325 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 AP3S1Q92572 193 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 EXTL2Q9UBQ6 330 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 SHPKQ9UHJ6 478 aa11.05□□□□□ -0.64
DDX56-210ENST00000479440 PAIP2BQ9ULR5 123 aaKnown RBP11.05□□□□□ -0.64
DDX56-210ENST00000479440 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
DDX56-210ENST00000479440 GPR132Q9UNW8 380 aa11.04□□□□□ -0.64
DDX56-210ENST00000479440 PIGBOS1A0A0B4J2F0 54 aa11.03□□□□□ -0.64
DDX56-210ENST00000479440 H3BRN7 92 aa11.03□□□□□ -0.64
DDX56-210ENST00000479440 SMR3BP02814 79 aaPredicted RBP11.03□□□□□ -0.64
DDX56-210ENST00000479440 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
DDX56-210ENST00000479440 NCS1P62166 190 aa11.03□□□□□ -0.64
DDX56-210ENST00000479440 SSBP1Q04837 148 aaKnown RBP11.03□□□□□ -0.64
DDX56-210ENST00000479440 LRRC20Q8TCA0 184 aa11.03□□□□□ -0.64
DDX56-210ENST00000479440 PRR13Q9NZ81 148 aa11.03□□□□□ -0.64
DDX56-210ENST00000479440 MDFICQ9P1T7 246 aa11.03□□□□□ -0.64
DDX56-210ENST00000479440 A0A096LPF7 62 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 IAPPP10997 89 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 ANXA3P12429 323 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 CXCL3P19876 107 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 RAP2BP61225 183 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 SRPXP78539 464 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 PSG3Q16557 428 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 TMPRSS5Q9H3S3 457 aa11.02□□□□□ -0.65
DDX56-210ENST00000479440 A0A087WTM6 91 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 A0A087X0K7 114 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 DNAH10OSP0CZ25 163 aa11.01□□□□□ -0.65
DDX56-210ENST00000479440 GATA2P23769 480 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms