RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 EFNA4P52798 201 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 MFAP4P55083 255 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 CX3CL1P78423 397 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 JOSD1Q15040 202 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 PYY3Q5JQD4 70 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 GFI1BQ5VTD9 330 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 ATP5L2Q7Z4Y8 100 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 BPIFA4PQ86YQ2 179 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 OR8I2Q8N0Y5 310 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 GBGT1Q8N5D6 347 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 C11orf42Q8N5U0 333 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 ARPC1AQ92747 370 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 BORCS7Q96B45 105 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 FAM167A-AS1Q96KT0 104 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 IGF2BP2-AS1Q96M15 143 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 NOL4LQ96MY1 436 aaPredicted RBP4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 GPR82Q96P67 336 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 AAMDCQ9H7C9 122 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 UBTD1Q9HAC8 227 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 ZNF586Q9NXT0 402 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 RPH3ALQ9UNE2 315 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 TBL2Q9Y4P3 447 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 V9GYV3 84 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 DMXL2Q8TDJ6 3036 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 PLCE1Q9P212 2302 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 PRR14LQ5THK1 2151 aa4.65□□□□□ -1.66
ATPAF1-204ENST00000474020 RP1L1Q8IWN7 2480 aaPredicted RBP4.65□□□□□ -1.66
ATPAF1-204ENST00000474020 DOCK11Q5JSL3 2073 aa4.65□□□□□ -1.66
ATPAF1-204ENST00000474020 DSCAML1Q8TD84 2053 aa4.65□□□□□ -1.66
ATPAF1-204ENST00000474020 IGKV1D-37A0A075B6S9 117 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 SERTM2A0A1B0GWG4 89 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 SMIM27A0A1W2PRY6 76 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 TMEM8BA6NDV4 472 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 FBLL1A6NHQ2 334 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 CGB1A6NKQ9 187 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 IFITM10A6NMD0 228 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 NPIPB5A8MRT5 1133 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 ODF3BA8MYP8 253 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 TEX22C9J3V5 150 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 E7EUB6 86 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 NDUFA3O95167 84 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 TOMM40O96008 361 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 IGHV3-48P01763 117 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 APCSP02743 223 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 APELAP0DMC3 54 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 CBLN1P23435 193 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 CNTFRP26992 372 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 Q0VG73 95 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 OR5I1Q13606 314 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 C5orf64Q2M2E5 130 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 Q56UQ5 140 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 C11orf71Q6IPW1 123 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 PATE2Q6UY27 113 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 VMO1Q7Z5L0 202 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 LYPD1Q8N2G4 141 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 SIGLECL1Q8N7X8 197 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 OR4B1Q8NGF8 309 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 RITA1Q96K30 269 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 ZNF48Q96MX3 618 aaPredicted RBP4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 MS4A10Q96PG2 267 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 SLC25A39Q9BZJ4 359 aaPredicted RBP4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 RNASE7Q9H1E1 156 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 Q9H3A6 140 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 RPP21Q9H633 154 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 ZNF492Q9P255 531 aa4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 YLPM1P49750 1951 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 DIDO1Q9BTC0 2240 aaKnown RBP4.65□□□□□ -1.67
ATPAF1-204ENST00000474020 APC2O95996 2303 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ACACAQ13085 2346 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ABCA12Q86UK0 2595 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ZGRF1Q86YA3 2104 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 TRGV11A0A075B6L2 103 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 IGHV3-21A0A0B4J1V1 117 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 TRBV6-1A0A0K0K1D8 114 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ZNF705FA8MVS1 300 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 I3L2K1 104 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 HLA-DRB1P01911 266 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 TCRAP04437 139 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 IGLC1P0CG04 106 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ZNF705DP0CH99 300 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ZNF705BP0CI00 300 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 CT45A10P0DMU9 189 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 PSG1P11464 419 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 GP9P14770 177 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 RAB9AP51151 201 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 TCL1AP56279 114 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 CTAG1AP78358 180 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 SSBP2P81877 361 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 PSG9Q00887 426 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 CYB5R2Q6BCY4 276 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 PRR27Q6MZM9 219 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ZNF562Q6V9R5 426 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 ZNF600Q6ZNG1 722 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 WIPF2Q8TF74 440 aaPredicted RBP4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 TSKUQ8WUA8 353 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 IGFBPL1Q8WX77 278 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 RNF125Q96EQ8 232 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 TXN2Q99757 166 aa4.64□□□□□ -1.67
ATPAF1-204ENST00000474020 SHANK2-AS3Q9BTD1 123 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms